DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and idh2

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_595203.2 Gene:idh2 / 2541260 PomBaseID:SPBC902.05c Length:379 Species:Schizosaccharomyces pombe


Alignment Length:361 Identity:209/361 - (57%)
Similarity:270/361 - (74%) Gaps:9/361 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TATPAVSQVNATPAASRSY-----SSGTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDV 84
            :|..:..:.::|.||:.:|     ::|...||:|.||||||||:.:|::||.||.||||||.|.|
pombe    19 SACYSFQRFSSTKAAAGTYEGVKNANGNYTVTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKV 83

  Fly    85 TPVRGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEGY 149
            .|:. .:|...||..|.:||..||:.|||||.||:||||.|:||.||:.|.|:||||||.|:.||
pombe    84 YPIL-KNGTTTIPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTLRRTFGLFANVRPCVSITGY 147

  Fly   150 KTLYDDVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVV 214
            ||.||:|:.|.|||||||||||||||::.||||||||||..||:||..||||||:...:..:|||
pombe   148 KTPYDNVNTVLIRENTEGEYSGIEHEVIPGVVQSIKLITRAASERVIRYAFQYARQTGKNNITVV 212

  Fly   215 HKANIMRMSDGLFLRCVRDMAQKFPEIQFEEKYLDTVCLNMVQNPGKYD--VLVMPNLYGDILSD 277
            |||.||||:|||||.|.:::|.::|:|:..|:.||..||.:|.:|..|:  |:|||||||||:||
pombe   213 HKATIMRMADGLFLECAKELAPEYPDIELREEILDNACLKIVTDPVPYNNTVMVMPNLYGDIVSD 277

  Fly   278 MCAGLVGGLGLTPSGNMGLNGALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKI 342
            |||||:||||||||||:|...::||:|||||||||||.||||||||||:||||:||.||.||.:|
pombe   278 MCAGLIGGLGLTPSGNIGNQASIFEAVHGTAPDIAGKGLANPTALLLSSVMMLKHMNLNDYAKRI 342

  Fly   343 ERAAFETIKEG-KYLTGDLGGRAKCSEFTNEICAKL 377
            |.|.|:|:... ...|.||||::...::|:.|.:||
pombe   343 ESAIFDTLANNPDARTKDLGGKSNNVQYTDAIISKL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 202/333 (61%)
idh2NP_595203.2 Iso_dh 44..378 CDD:294303 202/334 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 404 1.000 Domainoid score I98
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4037
Inparanoid 1 1.050 412 1.000 Inparanoid score I361
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - otm47211
orthoMCL 1 0.900 - - OOG6_100541
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R586
SonicParanoid 1 1.000 - - X402
TreeFam 1 0.960 - -
1413.860

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