DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and idha-1

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_492330.2 Gene:idha-1 / 172655 WormBaseID:WBGene00009664 Length:358 Species:Caenorhabditis elegans


Alignment Length:349 Identity:246/349 - (70%)
Similarity:292/349 - (83%) Gaps:1/349 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VSQVNATPAASRSYSSG-TKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGK 93
            :.:.::|...|..|||| .::|||||||||||||||:|||||.||:.||.|:.||||||:|.||.
 Worm     6 IKKASSTVGQSIRYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGV 70

  Fly    94 FGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEGYKTLYDDVDV 158
            |.||...|:.::.||:||||||.||:||||||||||:||||:|||||||||||||:|||||:|||
 Worm    71 FRIPSRCIELMHANKVGLKGPLETPIGKGHRSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDV 135

  Fly   159 VTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMS 223
            |||||||||||||||||||.|||||||||||.||:.||.:||:||:.|.||.||.||||||||.|
 Worm   136 VTIRENTEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANIMRQS 200

  Fly   224 DGLFLRCVRDMAQKFPEIQFEEKYLDTVCLNMVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGL 288
            |||||...|:.|..:|:|:|:|.|||||||||||:|.:||||||||||||||||:|||||||||:
 Worm   201 DGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVGGLGV 265

  Fly   289 TPSGNMGLNGALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEG 353
            |||||:|...|:|||||||||||||:|.|||||||||||||||:|.|..:|.:||:|.|:.|.:|
 Worm   266 TPSGNIGKGAAVFESVHGTAPDIAGQDKANPTALLLSAVMMLRYMNLPQHAARIEKAVFDAIADG 330

  Fly   354 KYLTGDLGGRAKCSEFTNEICAKL 377
            :..||||||...||.||.::||::
 Worm   331 RAKTGDLGGTGTCSSFTADVCARV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 241/331 (73%)
idha-1NP_492330.2 Iso_dh 22..354 CDD:294303 241/331 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167073
Domainoid 1 1.000 486 1.000 Domainoid score I190
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4037
Inparanoid 1 1.050 501 1.000 Inparanoid score I749
Isobase 1 0.950 - 0 Normalized mean entropy S361
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto20185
orthoMCL 1 0.900 - - OOG6_100541
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R586
SonicParanoid 1 1.000 - - X402
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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