DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and Idh3a

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_038936589.1 Gene:Idh3a / 114096 RGDID:70889 Length:374 Species:Rattus norvegicus


Alignment Length:368 Identity:249/368 - (67%)
Similarity:296/368 - (80%) Gaps:12/368 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PAVTATPAVSQVNATPAA------SRSYSS--GTKK---VTLIPGDGIGPEISAAVQKIFTAANV 75
            |.|.|..||.:|:|...:      ||...:  .||:   |||||||||||||||:|.|||.||..
  Rat     3 PGVAAVAAVREVDAMAGSAWVSKVSRLLGAFHNTKQVQTVTLIPGDGIGPEISASVMKIFDAAKA 67

  Fly    76 PIEWEAVDVTPVRGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFNLYANV 140
            ||:||..:||.::||.||:.||..|.:|::.||:||||||.||:..||.|:||.|||.|:|||||
  Rat    68 PIQWEERNVTAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANV 132

  Fly   141 RPCRSLEGYKTLYDDVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASKRVAEYAFQYAKN 205
            |||.|:|||||.|.||::||||||||||||||||.||||||||||||||.||||:||:||:||:|
  Rat   133 RPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARN 197

  Fly   206 NNRKKVTVVHKANIMRMSDGLFLRCVRDMAQKFPEIQFEEKYLDTVCLNMVQNPGKYDVLVMPNL 270
            |:|..||.|||||||||||||||:..|::|:...:|:|.|.|||||||||||:|.::||||||||
  Rat   198 NHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNL 262

  Fly   271 YGDILSDMCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHME 334
            |||||||:||||:||||:|||||:|.|| |:|||||||||||||||:|||||||||||||||||.
  Rat   263 YGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMG 327

  Fly   335 LNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377
            |..:|.|||.|.|.|||:||.||.||||.:|||:||.|||.::
  Rat   328 LFDHAAKIEAACFATIKDGKSLTKDLGGNSKCSDFTEEICRRV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 240/334 (72%)
Idh3aXP_038936589.1 mito_nad_idh 38..370 CDD:272942 231/322 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353520
Domainoid 1 1.000 474 1.000 Domainoid score I415
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4037
Inparanoid 1 1.050 486 1.000 Inparanoid score I1381
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto96732
orthoMCL 1 0.900 - - OOG6_100541
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X402
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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