DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pfrx and Y18H1A.4

DIOPT Version :10

Sequence 1:NP_477451.1 Gene:Pfrx / 32938 FlyBaseID:FBgn0027621 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_490770.1 Gene:Y18H1A.4 / 171661 WormBaseID:WBGene00021210 Length:220 Species:Caenorhabditis elegans


Alignment Length:221 Identity:55/221 - (24%)
Similarity:81/221 - (36%) Gaps:59/221 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   465 PRTIYLTRHGESEYNLS----------GLIGGDSNLSARGHQYANALSTFIAQQQIDGLRVWTSW 519
            ||.|::.||.|.|.|::          ||...:|.||.||.|.|..........||.  ..:.|.
 Worm     6 PRKIWIVRHAEREDNINRNWRKLDGADGLTSDNSMLSVRGRQQAKECKNRFENAQIS--HTFASP 68

  Fly   520 MKRAIQTVA--------DVKAPQERWKALNEIDAGHCEEM----------TYEQIKEKFPEEFKA 566
            ..|.|:|.:        .|||           |.|.||.:          ..:::.||||    .
 Worm    69 FDRTIETASTIIEDKGMKVKA-----------DGGLCEALYLCDKPPGFWETDKLAEKFP----L 118

  Fly   567 RDVNKF----AYRYPRGESYED-LVARLEPVIMEL--ERQGNVLVVSHQAVLRCLFAYFLDKSAD 624
            .|::..    .|..||....:| .|.|:...:..:  :.:||:|:|.|.|.:.......:.    
 Worm   119 VDLDYIPVFSKYTLPREGCGDDACVPRVGKTLRAIFEKYEGNLLLVGHGASIGACHEVLMG---- 179

  Fly   625 ELPYLYVPLHTVIKLTPVAYGCKVEH 650
              .:.||...||.:....|.| |..|
 Worm   180 --DFKYVGQATVSEFEETAPG-KYRH 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PfrxNP_477451.1 6PF2K 254..465 CDD:396253 55/221 (25%)
His_Phos_1 468..651 CDD:459751 53/218 (24%)
Y18H1A.4NP_490770.1 His_Phos_1 9..179 CDD:459751 45/186 (24%)

Return to query results.
Submit another query.