Sequence 1: | NP_001162796.1 | Gene: | pcm / 32935 | FlyBaseID: | FBgn0020261 | Length: | 1613 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014691.1 | Gene: | RAT1 / 854213 | SGDID: | S000005574 | Length: | 1006 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 935 | Identity: | 291/935 - (31%) |
---|---|---|---|
Similarity: | 412/935 - (44%) | Gaps: | 280/935 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGVPKFFRYISERYP-CLSELAREH-------CIP----------EFDNLYLDMNGIVHNCSHPD 47
Fly 48 DNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREA---- 108
Fly 109 EQQEAKAAQRGE--------LREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCTV 165
Fly 166 ILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFG 230
Fly 231 RNVKRTSVEET------------------RFFLLHLGLLREYL--ELEFDALRTDEHKLDIAQLI 275
Fly 276 DDWVLMGFLVGNDFIPHLPCLHISSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALT 340
Fly 341 EVELDHFK-EHADDLKYMNNKSEAFD-------MDVGE------ITE--------------SQNL 377
Fly 378 DSDLGALINKSMLLYDDDSEE------DCSDENAVLLKEFQ------------------------ 412
Fly 413 ----------------------------------------------------------------- 412
Fly 413 --------------------------NYKRNFYRNKFKRDPND--ELIEELCHHYVNALQWVLDY 449
Fly 450 YYRGVQSWDWYYPFHYTPFISDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLM 514
Fly 515 LLPTSPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERNRHG--- 576
Fly 577 ---------------PMY---------VYKY-------STVAQGPMPAYP-------PLR--ALP 601
Fly 602 VLYCTEVAKWSHEIAVNLPYSVCIELPNAARTVFFPGFPTMQHLPFDFELRNDRVKVFEQ-VSR- 664
Fly 665 -------NQNIV---------LKPR 673 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pcm | NP_001162796.1 | XRN1 | 1..843 | CDD:227382 | 291/935 (31%) |
XRN_N | 1..225 | CDD:281193 | 119/253 (47%) | ||
RAT1 | NP_014691.1 | XRN1 | 1..1006 | CDD:227382 | 291/935 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5049 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46801 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100417 | |
Panther | 1 | 1.100 | - | - | O | PTHR12341 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.810 |