Sequence 1: | NP_001162796.1 | Gene: | pcm / 32935 | FlyBaseID: | FBgn0020261 | Length: | 1613 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260166.1 | Gene: | Rat1 / 33964 | FlyBaseID: | FBgn0031868 | Length: | 908 | Species: | Drosophila melanogaster |
Alignment Length: | 673 | Identity: | 265/673 - (39%) |
---|---|---|---|
Similarity: | 367/673 - (54%) | Gaps: | 101/673 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGVPKFFRYISERYPCL---------------SELAREHCIP-----EFDNLYLDMNGIVHNCSH 45
Fly 46 PDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQ 110
Fly 111 QEAKAAQ-------RG-----ELREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRC 163
Fly 164 TVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLIILGLCTHELHFVVLREEV- 227
Fly 228 -----------KFGRNVKR---------TSVE---------ETRFFLLHLGLLREYLE--LEFDA 261
Fly 262 LRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISSNALPLLYRTYIG-IYPTLGGNINENG 325
Fly 326 KLNLRRLQIFISALTEVELDHFK-----EHADDLKYMNNKSEAFDMDVGEITESQ---------- 375
Fly 376 ------NLDSDLGALINK----SMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYRNKFKRDP-ND 429
Fly 430 ELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIEQVEIAFHMGT-PFLPFQQ 493
Fly 494 LLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAM 558
Fly 559 LPCEAQLSLEERERNRHGPMYVY 581 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pcm | NP_001162796.1 | XRN1 | 1..843 | CDD:227382 | 265/673 (39%) |
XRN_N | 1..225 | CDD:281193 | 118/255 (46%) | ||
Rat1 | NP_001260166.1 | XRN1 | 1..735 | CDD:227382 | 265/673 (39%) |
XRN_N | 1..255 | CDD:281193 | 118/255 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45452932 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5049 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D150649at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46801 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100417 | |
Panther | 1 | 1.100 | - | - | P | PTHR12341 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.750 |