Sequence 1: | NP_001162796.1 | Gene: | pcm / 32935 | FlyBaseID: | FBgn0020261 | Length: | 1613 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001304889.1 | Gene: | XRN2 / 22803 | HGNCID: | 12836 | Length: | 1028 | Species: | Homo sapiens |
Alignment Length: | 802 | Identity: | 293/802 - (36%) |
---|---|---|---|
Similarity: | 401/802 - (50%) | Gaps: | 156/802 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRA 92
Fly 93 KMNQQRSRRFRTAREAEQQEAKAAQRGELREH--------------ERFDSNCITPGTEFMVRLQ 143
Fly 144 EGLRAFLKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADL 208
Fly 209 IILGLCTHELHFVVLREEVK------------FGRNVK------------------RTSVEETRF 243
Fly 244 FLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISSNALPLLYR 308
Fly 309 TYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADD-------------------- 353
Fly 354 ---------------------------------LKYMNNKSEAFDMDVGEITESQNLDSDLGALI 385
Fly 386 NKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYRNKFKRDPNDELI-EELCHHYVNALQWVLDY 449
Fly 450 YYRGVQSWDWYYPFHYTPFISDLKNIEQVEIAFHMGT-PFLPFQQLLAVLPAASAKLLPVAYHDL 513
Fly 514 MLLPTSPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN----- 573
Fly 574 -----RHGPMYVY---KYSTVAQGPMPAYPPL-------------RALP-VLYCTEVAKWSHEIA 616
Fly 617 VNLPYSVCIELPNAA-----RTVFFPGF--PTMQHLPFDFELRNDRVKVFEQVSRNQNIVLKPRK 674
Fly 675 RQLEDTLTAVASQYLGKVIHVG 696 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pcm | NP_001162796.1 | XRN1 | 1..843 | CDD:227382 | 293/802 (37%) |
XRN_N | 1..225 | CDD:281193 | 113/210 (54%) | ||
XRN2 | NP_001304889.1 | XRN_N | 113..331 | CDD:281193 | 113/210 (54%) |
XRN1 | 118..865 | CDD:227382 | 283/754 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5049 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D150649at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100417 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.720 |