DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32533 and PRP2

DIOPT Version :10

Sequence 1:NP_728244.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_014408.1 Gene:PRP2 / 855745 SGDID:S000005294 Length:876 Species:Saccharomyces cerevisiae


Alignment Length:829 Identity:228/829 - (27%)
Similarity:378/829 - (45%) Gaps:167/829 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 DADELLQEARDQMQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVV 165
            :.|:||.|.:.|.:::....|       :||: :||..:::.::.||:.:::.:|.:.:..::|:
Yeast   186 EEDDLLPEEKLQYEARLAQAL-------ETEE-KRILTIQEARKLLPVHQYKDELLQEIKKNQVL 242

  Fly   166 IVAGDTGCGKSTQVPQYLYDFGYR-----SIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIR 225
            |:.|:||.||:||:||||.:.|:.     .||.|||||:|..|:..|||.|:....|..|.:|||
Yeast   243 IIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIR 307

  Fly   226 FERSRTKLTNIL-FITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQL 289
            ||...|....:| ::|:|:|||:....:.|.:|..:::||.|||.|..|.|:|:.|.:|..||.|
Yeast   308 FEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTL 372

  Fly   290 KLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPA 354
            ||::.|||:|.:.|..:|  :...:..||||.:|:.:.|...|              :.|.|..|
Yeast   373 KLLISSATMNAKKFSEFF--DNCPIFNVPGRRYPVDIHYTLQP--------------EANYIHAA 421

  Fly   355 PFVQVLSLIDQQYPT-SERGDVLIFVSGVNEIE----SVVEAVHEYATEQTHWLVLPLHSGQAIA 414
                 ::.|.|.:.| |..||:|:|::|..|||    .:.|.:.:..:.....::.|:::.....
Yeast   422 -----ITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQE 481

  Fly   415 DQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSA 479
            .|.|:|...||..||.:::|||||||||:||:|:|:|.|.|||.::..:....:|.....|::|.
Yeast   482 QQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASV 546

  Fly   480 DQRKGRAGRTGPGVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAP 543
            |||.|||||.|||.|||::|...| :..|..|.|||.|..|...:|.::|:|:.|:..||.::.|
Yeast   547 DQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKP 611

  Fly   544 ETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPE----VEQLLTLAA 604
            ....:.:::..|....||:.:..||.||:.:...|.|....|:|...:...:    :|:.||:.:
Yeast   612 SIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVS 676

  Fly   605 MLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQR 669
            ||. :.|.................:||||   ...:.::|.|...|.    :|.||:...|:.:.
Yeast   677 MLH-ETPSLFIGQKRDAAASVLSEVESDH---ILYLEIFNQWRNSKF----SRSWCQDHKIQFKT 733

  Fly   670 FYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERATRHGELRQLKAMKRRQRFEQPRQRKLLKQ 734
            ...|..:|.|..|..|..|:|..:|                                :.|..:..
Yeast   734 MLRVRNIRNQLFRCSEKVGLVEKND--------------------------------QARMKIGN 766

  Fly   735 SAGRVAEDEEEQEEAQGDDMRDVDFRLRFDPRQLALLERSSRLDRHSVVVLLKLLLGSGFYPQLA 799
            .||.:                                  ::|:.|..:         |||...:.
Yeast   767 IAGYI----------------------------------NARITRCFI---------SGFPMNIV 788

  Fly   800 ISDEFNY----CKGGGQQFFHTRLKPFVLQHPNSQFAKHFELLKLTESDLLPKPDFYTPKLPLSK 860
            ......|    ...||..         |..||.|       :|.:...:...:|..|        
Yeast   789 QLGPTGYQTMGRSSGGLN---------VSVHPTS-------ILFVNHKEKAQRPSKY-------- 829

  Fly   861 RHQLLCYQSLLETAKPYLINCIRLPAAQTLL-----LFSFAID--TNAG 902
                :.||.|:.|:|.::.:|:.:|..:.|:     :|...||  ||.|
Yeast   830 ----VLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFKDLIDDKTNRG 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_728244.1 HrpA 145..>619 CDD:441249 167/489 (34%)
OB_NTP_bind 792..897 CDD:400182 22/113 (19%)
PRP2NP_014408.1 PTZ00121 <7..174 CDD:173412
HrpA 223..>738 CDD:441249 178/543 (33%)
OB_NTP_bind 775..862 CDD:400182 22/123 (18%)
Blue background indicates that the domain is not in the aligned region.

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