DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and AT2G01130

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_178223.2 Gene:AT2G01130 / 814642 AraportID:AT2G01130 Length:1113 Species:Arabidopsis thaliana


Alignment Length:1153 Identity:296/1153 - (25%)
Similarity:505/1153 - (43%) Gaps:251/1153 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKKADEHASSRRRTQINLIEFSFLDHKAELVGLLQAKSRQVGRSLVENEADFWKFVGKYEAMMRS 69
            :::.:.|....:|.:..|.|  :|...:..:..:.|.|  |.|:...:..|.|            
plant   128 QREVNLHTDLLQRVEAYLTE--YLSKSSNRIDRVPANS--VSRTSSISSTDEW------------ 176

  Fly    70 TGQPVLPPRLAEAELSSMQPYHRSKHLALRLDADELLQEARDQMQSQFRHILLVYLDFRQTEKFQ 134
                           .|.||        |.:.|.::|.:...|::.:.::       ::.:.:.|
plant   177 ---------------FSEQP--------LPISATKILWQRSLQLRDRQQY-------WQASVEGQ 211

  Fly   135 RIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDF-------GYRSIA 192
            |   :..::.:||..:.|..:..|:..::|::::|:|||||:||:||::.:.       .:.||.
plant   212 R---MLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSII 273

  Fly   193 CTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQY 257
            ||||||::.:|:.:|||:|..:..|..|.:::|.|..:.:.|.:||.|.|:|||:|.|..||...
plant   274 CTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGV 338

  Fly   258 DALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLF 322
            ..:|:||||||.:..||||.:.|.||..|.:|||||||||::.|||..|||  ||.::.:||..:
plant   339 THVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFG--GAGVIYIPGFTY 401

  Fly   323 PIKLRYLPPPALELKAGQAT----------------SKRSQRNRIDPAPFV--QVLSLIDQQ--- 366
            |::..:| ...||:...:.|                :|:..:.|.....||  ..|...|.:   
plant   402 PVRSHFL-EDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRKSQITFVVEDALRAADFKEFS 465

  Fly   367 ----------YP-----------------TSERGDVLIFVSGVNEIESVVE--AVHEYATEQTHW 402
                      ||                 ....|.:|||::|.::|.|:.|  .:|.........
plant   466 PETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLV 530

  Fly   403 LVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQ 467
            ::|..|......:|..:|:....|:||.:::|||||||:|::.|.||:|.||.||.::||.....
plant   531 MLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTP 595

  Fly   468 RLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLP 532
            .|...|:||.||.||:|||||..||.|:.||....|:||..|..|||.|.||.::.||:.|:.|.
plant   596 CLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLG 660

  Fly   533 DVRAF--PFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPE 595
            .:..|  ..:::||...:::.|..||...||...|.:|.|||.|:.||:|..:||||::|::...
plant   661 SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGC 725

  Fly   596 VEQLLTLAAMLSVQNP-LTNRAHTDQRCVRE--RESLESDHGDLFTLVRLYNVWVQLKMRRDGTR 657
            ::.:||:||.|||::| ||.:   |::.:.|  :.....||.|...|||.|..|.:.: ......
plant   726 LDPILTVAAGLSVRDPFLTPQ---DKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAE-EESAVY 786

  Fly   658 QWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDS-------DSQLTSAERATRHGELRQLK 715
            .:|.:..:..|....:..||::|..:|:..|::..:.|       |:.||.|  ...:|....:.
plant   787 DYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRA--VICYGMYPGIC 849

  Fly   716 AMKRRQRFEQPRQRKLLKQSAGRVAEDEEEQEEAQGDDMRDVD-------FRLRFDPRQLALLER 773
            ::...:|           ..:.:..||.:....:..::.|:..       |..:.....:.|  |
plant   850 SVVHNER-----------SFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFL--R 901

  Fly   774 SSRLDRHSVVVLLKLLLGSGFYPQLAISDEFNYCK--GGGQQFFHTRLKPFVLQHPNSQFAKHFE 836
            .|.....|.::|        |...::..|...:.|  ||..:||   :||.|        |:.::
plant   902 DSTACSDSTLIL--------FGGSISKGDTDGHLKMLGGYLEFF---MKPDV--------AEIYQ 947

  Fly   837 LLKLTESDLLPKPDFYTPKLPLSKRHQLLCYQSLLETAKPYLINCIRLPAAQTLLLFSFAIDTNA 901
            .|| .|.|.|.:.....||:.:....:||              :.|||.                
plant   948 TLK-KELDELIQNKLLNPKVDMQAHRELL--------------SAIRLL---------------- 981

  Fly   902 GITQIACDGWLGLDLPMPGSGMELLRRAIELRRRWSRLLYDKLDDLKSKQESPSHSSDDRSSALW 966
             :::..|||....       |.::| |.:|:....::      ..|.|:.||.....:.:|.   
plant   982 -VSEDGCDGRFVF-------GHQIL-RPLEISALSTK------PSLFSRTESGPGGDNSKSQ--- 1028

  Fly   967 QDLVDYMALDVAYAIRRLLPADIKRLYTHQAPSARLAELKENPF--AVDFPMTPNEEKGGLNVSE 1029
                          ::.:|   .:..||  .|..:..:||.|.|  .|:|           |.::
plant  1029 --------------LQTIL---TRAGYT--VPMYKTKQLKNNKFQTTVEF-----------NETQ 1063

  Fly  1030 HVVYSCLAEQQWTTAMDATLRAEPWQCTRCDFELEEFDVLEQLVHRSK 1077
            .:...|  ..:.:...||...|..|.........|:.:.:.:|:.:.|
plant  1064 IMGQPC--SNKKSAEKDAAAEAIQWLKGGAKESHEQVNHMSKLLKKGK 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 76/178 (43%)
DEXDc 163..298 CDD:238005 63/141 (45%)
Helicase_C 358..490 CDD:278689 51/163 (31%)
HA2 560..640 CDD:214852 31/82 (38%)
OB_NTP_bind <792..897 CDD:285018 23/106 (22%)
AT2G01130NP_178223.2 DEXDc 225..402 CDD:214692 76/178 (43%)
DEXDc 237..379 CDD:238005 63/141 (45%)
Helicase_C 488..617 CDD:278689 46/128 (36%)
HA2 688..770 CDD:214852 31/84 (37%)
OB_NTP_bind 807..918 CDD:285018 20/133 (15%)
dsrm 1025..1087 CDD:278464 16/96 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.