DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and dhx36

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_001122016.2 Gene:dhx36 / 569072 ZFINID:ZDB-GENE-050419-20 Length:1037 Species:Danio rerio


Alignment Length:1104 Identity:281/1104 - (25%)
Similarity:463/1104 - (41%) Gaps:292/1104 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKKKADEHASSRRRTQINLIEFSFLDHKAELVGLLQAKSRQVGRSLVENEADFWKFVGKYEAMMR 68
            |||   ..|..|.|..:::.|    ..:..:..||....|.:||.:..:.:..|:  .|.||...
Zfish    79 IKK---SEAERRSRAVVHMDE----SREKHITQLLNTVQRDLGRDVHPSTSQSWR--NKDEARGH 134

  Fly    69 S--------TGQPVLPPRLAEAELSSMQPYHRSKHLALRLDA-----------DELLQEA----- 109
            |        ..|.::|       |..::|....:..|::..|           :.|||:.     
Zfish   135 SYFDGDDPVETQNIMP-------LPKVEPKDEKQEDAIKSRASLKEELNETNLEYLLQDVVQIPF 192

  Fly   110 ------RDQMQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVA 168
                  :||.:.:.....:..|.||               :.||....|::|...:..:||::::
Zfish   193 LDEELKKDQQKKEDNAAYIEMLKFR---------------KKLPSYGMREELVRLISANRVLVIS 242

  Fly   169 GDTGCGKSTQVPQY-LYDFGYRS------IACTQPRRLACVSLCKRVAHELLDDY--GSRVAFQI 224
            |:|||||:|||.|: |.||..|.      :.||||||::.:|:.:|||.|..:..  |....:||
Zfish   243 GETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQI 307

  Fly   225 RFE-RSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQ 288
            |.: |...|..::|:.|.|::|:.|.....|.....|:|||||||::..|.|:.:.|.||.||..
Zfish   308 RLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDD 372

  Fly   289 LKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALEL----------------K 337
            ||::|||||:|.|.|..||  ....::.:||..||: ..||....:||                :
Zfish   373 LKVVLMSATLNAEKFSKYF--NNCPMIHIPGYTFPV-TEYLLEDVVELLGFQPRYKQRKPHYRKR 434

  Fly   338 AGQATSKRSQRNRIDPAPF-------------------VQVLSLIDQQ---------------YP 368
            ....:|.|.::.:|: |.:                   ::||.::|..               ..
Zfish   435 NNHGSSARPEKGKIE-AKYHESWPCYARTLRDRFSDTTIEVLGMMDDDDNIDLELTAALIRHIAV 498

  Fly   369 TSERGDVLIFVSG---VNEIESVVEAVHEYATEQTHWLVLPLHS-------GQAIADQSKVFDYA 423
            ....|.:|:|:.|   ::.:..::.:...:.:.:..::::||||       .|.|:...:||...
Zfish   499 NENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKP 563

  Fly   424 PEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGR 488
            |.|:||.:::|||||||:|:|.|.:|:|.||:||.:||.....:.:...|||.::|.||||||||
Zfish   564 PPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGR 628

  Fly   489 TGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAF--PFIEAPETERIEQT 551
            ..||.|:.||...:.:..:.|..|||.|.||:.:.||:..:.|..:..|  ..::.|....||..
Zfish   629 VSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELA 693

  Fly   552 ILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQN----PL 612
            |..|....||..:||:||||..||.:|||..||||:|.|::...::.:||:||.||.::    ||
Zfish   694 ITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPL 758

  Fly   613 TNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLR 677
            ......|||.....::..|||   .::|..:..|...|.|  |:|                    
Zfish   759 GKEKIADQRRKMFSQNSRSDH---LSIVNAFLGWEDAKRR--GSR-------------------- 798

  Fly   678 QQFQRILESCGMVVASDSDSQLTSAERATRHGELRQLKAMKRRQRFEQPRQRKLLKQSAGRVAED 742
              |:|  |.|.       |:.|::       ..|:.|:.||                  |:.||.
Zfish   799 --FER--EYCW-------DNFLSA-------NTLQMLQNMK------------------GQFAEH 827

  Fly   743 EEEQEEAQGDDMRDVDFRLRFDPRQLALLERSSRLDRHSVVVLLKLLLGSGFYPQLA-ISDEFN- 805
            ..........|.:|....:..:.::                 |:|.::.:|.||::| ||...| 
Zfish   828 LLRAGFVNSKDPKDPSSNINSENKK-----------------LVKAVIVAGLYPKVAKISPSHNK 875

  Fly   806 --------YCKGGGQQFFHTRLKPFVLQHPNSQFAKHFELLKLTESDLLPKPDFYTPKLPLSKRH 862
                    |.|..|:          |..||.|..|:..:.                       ::
Zfish   876 KRPMPVKVYTKADGK----------VCIHPKSVNAEETQF-----------------------QY 907

  Fly   863 QLLCYQSLLETAKPYLINCIRLPAAQTLLLF--SFAIDTNAGITQIACDGWLGLDLPMPGSGMEL 925
            :.|.|...::|...:|.:|..: :..:||.|  :.:|..:.....||.|.|:...  .||....|
Zfish   908 KWLVYHLKMKTTSIFLYDCTEV-SPFSLLFFGGNISIQRDQDQDTIAVDEWIVFQ--SPGRIAHL 969

  Fly   926 LRRAIELRRRWSRLLYDKLD----------------------DLKSKQESPSHSSDDRSSALWQ 967
            ::   :|::....||.:|:.                      ||.:.||:|:......|..::|
Zfish   970 VK---DLKKELDVLLEEKIKSPHPVDWKDQQSKDCAVISAIIDLITTQETPAGDPSKDSQPVYQ 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 71/181 (39%)
DEXDc 163..298 CDD:238005 60/144 (42%)
Helicase_C 358..490 CDD:278689 49/156 (31%)
HA2 560..640 CDD:214852 33/83 (40%)
OB_NTP_bind <792..897 CDD:285018 23/116 (20%)
dhx36NP_001122016.2 HrpA 193..992 CDD:224557 248/934 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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