DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and dhx33

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:XP_002932324.1 Gene:dhx33 / 447985 XenbaseID:XB-GENE-949473 Length:678 Species:Xenopus tropicalis


Alignment Length:588 Identity:204/588 - (34%)
Similarity:317/588 - (53%) Gaps:44/588 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYD--FGYRS-IACTQPRRLA 200
            :.:.:|:|||...|..:...|.....|::.|:||.||:||:|||||:  .|.:| ||.|||||:|
 Frog    38 VEEQRRSLPIYLARSQIIAQLRKLDSVVIIGETGSGKTTQIPQYLYEASIGRQSIIAVTQPRRVA 102

  Fly   201 CVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEI 265
            .:||..||:.|...:....|.:.:|||...::.|.|.|:|:|:|||:......|.:|..:||||.
 Frog   103 AISLATRVSEERRTELSKLVGYTVRFEDVTSEETKIKFLTDGMLLREAIGDPLLRKYSVVILDEA 167

  Fly   266 HERNLFGDFLLGVTKCLLRARPQ-----LKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIK 325
            |||.:..|.|.||.|...:.|.:     ||:|:||||::|:||..||  .||.::.:.||..||:
 Frog   168 HERTIHTDVLFGVVKSAQKKRKEQEKQPLKIIIMSATMDVDLFSEYF--NGAPVLYLEGRQHPIQ 230

  Fly   326 LRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEIESVVE 390
            :.|              :|.||.:.:. |..|.|.. :.|:.|.|.  |:|:|::|..|||::.:
 Frog   231 IFY--------------TKESQSDYLQ-AALVTVFQ-VHQEVPASH--DILVFLTGQEEIEAMTK 277

  Fly   391 AVHEYA----TEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVD 451
            ...:.:    .:....:|:||::....:.|.:||..||:|.||.|:||||||||:|:.|:::|||
 Frog   278 TCRDISKHLPDDCPKMVVMPLYASLPHSQQLRVFQNAPKGQRKVILSTNIAETSITIPGIKYVVD 342

  Fly   452 SGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPEIYR 516
            :|.||...::.....:.|....|||:.|.||.|||||...|:|:|||..|::..||....|||.|
 Frog   343 TGMVKAKKYNPESGLEVLAVQKVSKAQAWQRTGRAGREDSGICYRLYKEEEFEKFEEMTVPEIQR 407

  Fly   517 VPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSVEEK-----ITPLGRSLAN 576
            ..|.:::||::.:.:|:|..|.|:..|..:.|:..|..|  |...:||.|     :||||:.:|.
 Frog   408 CNLASVMLQLLVLRVPNVHTFDFMSKPSPDSIQAAIDQL--HLLGAVERKGDQIVLTPLGKKMAA 470

  Fly   577 LPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVR 641
            .|:|....|.:|:...|...|::||:.::|||.:.|.|.|.........|:...|..||..||:.
 Frog   471 FPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLHNPASKRDEVQAARKKFISSEGDHITLLN 535

  Fly   642 LYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERAT 706
            :|..:..|...:|    |||...|..:....|.::|.|.:.|.....|.:.| |.:...:..:..
 Frog   536 IYRAFKNLGKNKD----WCRENFINGRNMTMVLEVRSQLRDICIKLSMPMES-SRTDTRNIRQCL 595

  Fly   707 RHG 709
            .||
 Frog   596 AHG 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 74/179 (41%)
DEXDc 163..298 CDD:238005 61/142 (43%)
Helicase_C 358..490 CDD:278689 51/135 (38%)
HA2 560..640 CDD:214852 27/84 (32%)
OB_NTP_bind <792..897 CDD:285018
dhx33XP_002932324.1 HrpA 38..667 CDD:224557 204/588 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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