DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and l(1)G0007

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster


Alignment Length:603 Identity:204/603 - (33%)
Similarity:320/603 - (53%) Gaps:60/603 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 QEARDQMQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDT 171
            |:..|.|:.|         |......|.|.:.:.:.:|.||:...|::|...:..:.|:|:.|:|
  Fly   504 QKFADHMRDQ---------DTGGKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGET 559

  Fly   172 GCGKSTQVPQYLYDFGYRS---IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKL 233
            |.||:||:.|||::.||..   |.||||||:|.:|:.|||:.|:....|..|.:.||||...::.
  Fly   560 GSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSER 624

  Fly   234 TNILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATI 298
            |.|.::|:|:|||:......||.|.|:|:||.|||:|..|.|.|:.:.::..|..||||:.|||:
  Fly   625 TVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATM 689

  Fly   299 NVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLI 363
            :...|..:||  ......:|||.||:.:.:              ||.:..:.::.| ..|.|   
  Fly   690 DSSKFATFFG--NVPTFTIPGRTFPVDVMF--------------SKNTCEDYVESA-VKQAL--- 734

  Fly   364 DQQYPTSERGDVLIFVSGVNEIESVVEAVHEYATEQTH---WLVLPLHSGQAIAD-QSKVFDYAP 424
             |.:.|...||:|||:.|..:||...|.:.|...|..:   ..:||::| |..:| |:|:|..:.
  Fly   735 -QVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYS-QLPSDLQAKIFQKSS 797

  Fly   425 EGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRT 489
            :|:|||:|:||||||||||||:.:|:|||..|...::.......|:.:.:|:::|:||.||||||
  Fly   798 DGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRT 862

  Fly   490 GPGVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTIL 553
            |||..:||||..|| :...|...|||.|..|...:|.:.|:|:.|:..|.|::.|..:.|..::.
  Fly   863 GPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLY 927

  Fly   554 ALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQN----PLTN 614
            .|....||.....:|.|||.:|..|::....:||::........::|.:.:||||.:    |...
  Fly   928 QLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGR 992

  Fly   615 RAHTDQRCVRER-ESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQ 678
            ....|.  |||: :..||||   .|.:.:|..|.|    .:.:..||....|..:...:|.::||
  Fly   993 EDEADG--VREKFQRPESDH---LTYLNVYQQWRQ----NNYSSTWCNEHFIHIKAMRKVREVRQ 1048

  Fly   679 QFQRILE-------SCGM 689
            |.:.|:.       |||:
  Fly  1049 QLKDIMTQQNLSVISCGI 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 71/174 (41%)
DEXDc 163..298 CDD:238005 61/137 (45%)
Helicase_C 358..490 CDD:278689 55/135 (41%)
HA2 560..640 CDD:214852 25/84 (30%)
OB_NTP_bind <792..897 CDD:285018
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 75/187 (40%)
DEXDc 551..689 CDD:238005 61/137 (45%)
HELICc 722..870 CDD:238034 60/153 (39%)
HA2 932..1014 CDD:214852 25/86 (29%)
OB_NTP_bind 1048..1148 CDD:285018 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468109
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.