DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and Dhx8

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:XP_006247348.1 Gene:Dhx8 / 287727 RGDID:1310723 Length:1242 Species:Rattus norvegicus


Alignment Length:871 Identity:258/871 - (29%)
Similarity:408/871 - (46%) Gaps:155/871 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DEHASSRRRTQI--------------NLI---EFSFLDHKAELVGLL----QAKSRQVGRSLVEN 52
            |:....:|.|:|              |::   ||...|   |..|:|    ..:...:...|||.
  Rat   405 DDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD---EETGILPKVDDEEDEDLEIELVEE 466

  Fly    53 EADFWKFVGKYE-------------------AMMRST---GQPVLPPRLAEAELSSMQPYHRSKH 95
            |..|.:...|..                   |||:|.   .:..|.....|||:.|: |...:||
  Rat   467 EPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSI-PMGLNKH 530

  Fly    96 LALRLDADELLQEARDQMQSQFRHILLVYLDFRQTEKF-----------QRIRKLRQTQRNLPIA 149
            .     .|.|......|:.:..|.|.::..|..:.:|.           :....:.:.:.:|||.
  Rat   531 W-----VDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIY 590

  Fly   150 RFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPRRLACVSLCKRVAHE 211
            :.::.|.:|:..::::||.|:||.||:||:.|||.:.||.|   |.||||||:|.:|:.|||:.|
  Rat   591 KLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEE 655

  Fly   212 LLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLL 276
            .....|..|.:.||||...:..|.|.::|:|:|||:..:..:|.||..::|||.|||.:..|.|.
  Rat   656 FGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF 720

  Fly   277 GVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQA 341
            |:.|..::.|..:|||:.|||::...|..||.|  |.:..:|||.:|:::.|             
  Rat   721 GLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYE--APIFTIPGRTYPVEILY------------- 770

  Fly   342 TSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEIESVVEAVHE----YATEQTHW 402
             :|..:.:.:| |..:.|:    |.:.|...||:|:|::|..||::..|.::|    ...:....
  Rat   771 -TKEPETDYLD-ASLITVM----QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL 829

  Fly   403 LVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQ 467
            ::||::|......|:::||.||.|.||.:::|||||||||:||:.:|||.|.||:..:::.....
  Rat   830 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 894

  Fly   468 RLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPT--PEIYRVPLDTMLLQMVSMG 530
            :|....:|::.|.||.|||||||||.|:||||...|.. |...|  |||.|..|.:.:|.:.:||
  Rat   895 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD-EMLTTNVPEIQRTNLASTVLSLKAMG 958

  Fly   531 LPDVRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPE 595
            :.|:.:|.|::||..|.:...:..|....||..|..:|.|||.:|..|:|..:.|||:|......
  Rat   959 INDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGC 1023

  Fly   596 VEQLLTLAAMLSVQN----PLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGT 656
            .|::||:.:||||||    |...:|..||:    :.......||..||:.:||.|...|.    :
  Rat  1024 SEEMLTIVSMLSVQNVFYRPKDKQALADQK----KAKFHQTEGDHLTLLAVYNSWKNNKF----S 1080

  Fly   657 RQWCRRLGIEEQRFYEVTKLRQQFQRILE-------SCGMVVASDSDSQLTSAERATRHGELRQL 714
            ..||....|:.:.......:|:|...|::       |||        ......::|...|..|  
  Rat  1081 NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG--------KSTVRVQKAICSGFFR-- 1135

  Fly   715 KAMKRRQRFEQPRQ--RKLLKQSA--------------------GRVAEDEEEQEEAQGDDMR-D 756
            .|.|:     .|::  |.|:.|..                    ..|...:|...|....|.| .
  Rat  1136 NAAKK-----DPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWL 1195

  Fly   757 VDFRLRF----DPRQLALLERSSRLD 778
            |:|...|    ||.:|:..::..||:
  Rat  1196 VEFAPAFFKVSDPTKLSKQKKQQRLE 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 72/174 (41%)
DEXDc 163..298 CDD:238005 60/137 (44%)
Helicase_C 358..490 CDD:278689 50/135 (37%)
HA2 560..640 CDD:214852 30/83 (36%)
OB_NTP_bind <792..897 CDD:285018
Dhx8XP_006247348.1 S1_DHX8_helicase 287..365 CDD:240189
DEXDc 583..768 CDD:214692 75/186 (40%)
DEXDc 604..742 CDD:238005 60/137 (44%)
HELICc 767..924 CDD:238034 59/175 (34%)
HA2 986..1068 CDD:214852 30/85 (35%)
OB_NTP_bind 1102..1201 CDD:285018 21/113 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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