DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32533 and rha-2

DIOPT Version :10

Sequence 1:NP_728244.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_498895.1 Gene:rha-2 / 176207 WormBaseID:WBGene00015525 Length:1148 Species:Caenorhabditis elegans


Alignment Length:942 Identity:257/942 - (27%)
Similarity:415/942 - (44%) Gaps:226/942 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DELLQEARDQMQSQFRHILLV---YLDFRQTEKFQRIRKLRQTQRNLPIARFRKDLR--EALDTS 162
            |:::.:..|..:|....||.:   .:..|:....:|.:::::::..|||  |.:::|  ||::.:
 Worm   190 DQIVVKREDDEESDNEDILALPTTTVINRKKVIVERSKEIQKSRAELPI--FAEEMRIVEAINEN 252

  Fly   163 RVVIVAGDTGCGKSTQVPQYLYDFGYRS----IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQ 223
            .|.:|.|:||.||:||:||:||:.||.|    |..|:|||:|.:::.:||..||...  ..|::|
 Worm   253 LVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMAQRVGVELAKP--DEVSYQ 315

  Fly   224 IRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLL----- 283
            ||:|.:|::.|||||:|:|:|::::.....|.:|..:::||.|||:::.|.|:|:...::     
 Worm   316 IRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSK 380

  Fly   284 RARPQLKLILMSATINVELF--HGYFGEEGARLVQVPGRLFPIKLRY------------------ 328
            .||| |:|::||||:.::.|  ...|.....::::|..|.||:.:.:                  
 Worm   381 TARP-LRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCR 444

  Fly   329 ----LPPPA-LELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYP----TSERGDVLIFVSGVNE 384
                |||.| |....||...|             |:::.:.::||    |.:.|:||  |.|..|
 Worm   445 IHETLPPGAILVFVTGQHEVK-------------QLITKLKKRYPVVYETDKNGEVL--VKGTKE 494

  Fly   385 -IESVVEAVH----EYATEQT-------------------------------------------- 400
             .|..|||..    |...|:|                                            
 Worm   495 WKEKKVEAAKSIKLEDFKEETPETEDFEDVDDGLMDGDDMNERGAAEAFDDYEEFENGDGDLSDG 559

  Fly   401 --------------HWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVD 451
                          ....|||:|..::..|.:|||..|.|||.|::|||:||||||:.||::|:|
 Worm   560 KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVID 624

  Fly   452 SGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPEIYR 516
            .|..|...:|:.....|.....:|::|.|||.|||||...|..:|||::..|..|..:..|||..
 Worm   625 GGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFVKFADPEILS 689

  Fly   517 VPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCAL----------SVEEKITPLG 571
            .|.|.::|.:.||.:..|..|||..||:.:.:|.   |.|:.|.|          ..|.:||.||
 Worm   690 KPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLES---AEKRLCRLGALSESTKNGKTEARITKLG 751

  Fly   572 RSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPL----TNRAHTDQ-------RCVRE 625
            ::||..|:..|..|.:.|......:...:.|.::|||:.||    :.|..|.:       ..::|
 Worm   752 KTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEETKELMKNVLKE 816

  Fly   626 RESLESDH------GDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRIL 684
            |....| |      |||..|:...:|..|:|.   ..|: |.::|:..:...|..|||||...|:
 Worm   817 RRRWCS-HTGARRLGDLKVLMHAASVAEQIKY---NARE-CEKVGLRVKALVEARKLRQQLTNIV 876

  Fly   685 E-SCGM--VVASDSDSQLTSAERATRHGELRQLKAMKRRQRFEQPRQRKLLKQSAGRVAEDEEEQ 746
            . ||..  ..|.|||....:.::|..   |||:.......|         |.:...|....||.|
 Worm   877 NASCKKEHAAALDSDLPPPTDQQAQL---LRQMVVASFSDR---------LARRVDRSVGQEEVQ 929

  Fly   747 EEAQGDDMRDVDFRLRFDPRQLALLERSSRLDRHSVV-VLLKLLLGSGFYPQLAISDEF------ 804
            :.|....:  :...:..||..:...|....:....:| |..|.|:.|    ..|:..|:      
 Worm   930 KGAYETTL--IKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTS----VCAVDKEWLSRLAE 988

  Fly   805 NYCKGG----GQQFFHTRLKPFVL------------QHPNS--------QFAKHFELLKLTESDL 845
            :||..|    .|:..:..:|..|:            :.||.        ...::|.|. |.:..:
 Worm   989 SYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFGPLNWELPNENRSVPHDIMMYRYFALF-LLDGLV 1052

  Fly   846 LPKPDFYTPKL------------PLSKRHQLL 865
            ..|...|||||            .|.||.::|
 Worm  1053 FEKLKEYTPKLLAPPSTMVKSWAKLQKRTEML 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_728244.1 HrpA 145..>619 CDD:441249 180/590 (31%)
OB_NTP_bind 792..897 CDD:400182 24/116 (21%)
rha-2NP_498895.1 HrpA 234..>1020 CDD:441249 235/831 (28%)

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