DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and dhx29

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:XP_004910409.1 Gene:dhx29 / 100216168 XenbaseID:XB-GENE-995260 Length:1363 Species:Xenopus tropicalis


Alignment Length:1063 Identity:268/1063 - (25%)
Similarity:450/1063 - (42%) Gaps:272/1063 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ADEHASSRRRTQINLIEFSFLDHKAELVGLLQAKSRQVGRS-LVENEADFWKFVGKYEAMMRSTG 71
            |::....:.:.:.|.....|:......:.|.|.:.:..|:: :.|:..|.|:.:...|..:.:. 
 Frog   469 AEKQVQEQNKMESNKPRDQFITKLLNKLKLQQNQLKSSGQNPVTEDPEDSWENLACDEEQIETC- 532

  Fly    72 QPVLPPRLAEAELSSMQPYHRSKHLALRLDADELLQEARDQMQSQFRHILLVYLDFRQTEKFQRI 136
                 |..|:.:  .::|..            .||.::||.:                  |::|:
 Frog   533 -----PSTAQTD--DLEPIR------------NLLLKSRDSI------------------KYKRL 560

  Fly   137 RKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDF--------GYRSIAC 193
            ...|:   .||:...||.:.|.|...||::|||:||.||||||||:|.:.        |..:|.|
 Frog   561 LNDRE---QLPVFAHRKFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLLLNRGSPGKCNIVC 622

  Fly   194 TQPRRLACVSLCKRVAHELLDDYG-----SRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAAN 253
            |||||::.:||..||..||..|.|     |...:|||.|....:.|.:|:.|.|:|||:|...:.
 Frog   623 TQPRRISAMSLATRVCEELGCDSGPGGRNSLCGYQIRMESRTGEATRLLYCTTGILLRKLQEDSM 687

  Fly   254 LDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVP 318
            |.....:|:||:|||.:..||||.:.:.:|..|..|.|:|||||::.|.|..||..  ..::::.
 Frog   688 LKNISHIIVDEVHERTVQSDFLLIILREILHKRSDLHLVLMSATVDCEKFSSYFTH--CPIIRIS 750

  Fly   319 GRLFPIKLRYLPP--------------------------------------------PALE---L 336
            ||.||:::.:|..                                            |||.   |
 Frog   751 GRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEEEITLSVTGKGGSSTKYQEFIPALSDTGL 815

  Fly   337 KAGQATSKRSQR----------NRIDPAPFVQVLSLID--QQYPTSERGDVLIFVSGVNEIESVV 389
            ..||...:.|.:          |:|:....:::|..:|  .||...| |.||||:.|:.:|:.:.
 Frog   816 DLGQRYQRYSSQTRHAVLYMNPNKINLDLILELLVFLDISPQYRNVE-GAVLIFLPGLADIQQLY 879

  Fly   390 EAV------HEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRF 448
            :.:      |    ::..:.::.|||..:..||::.|...|.|.||.:::||||||.:|:..|.|
 Frog   880 DILSSDKRFH----DRRRYKLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVF 940

  Fly   449 VVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPE 513
            |||:|:.||..:..:.:...|.|.::||:||.||:|||||...|.||||||.|::..|..|..||
 Frog   941 VVDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRVRDGFCFRLYTRERFEGFMEYSVPE 1005

  Fly   514 IYRVPLDTMLLQMV--SMGLPDVRAFPFIEAPETERIEQTILALKQ--HCALSVEEKITPLGRSL 574
            |.||||:.:.|.::  .:|.|:......::.|:.:.|...:..|::  .|.| ::.::||||:.|
 Frog  1006 ILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEL-IQPRLTPLGQHL 1069

  Fly   575 ANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTL 639
            |.|||.:.|||||:.|::|..::.:.||||.::.::|.........|....:.|:...:.|..|:
 Frog  1070 AALPVNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPIGEKDRADLAKSSMAVANSDHLTI 1134

  Fly   640 VRLYNVWVQLKMRRDG---TRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTS 701
            .|.|..|..:  |.||   ...:||:..:..:....:..::|:..|::.:.|             
 Frog  1135 FRAYLGWKAI--RSDGYAAEMSYCRKNFLNRKALLTIEDVKQELIRLVRAAG------------- 1184

  Fly   702 AERATRHGELRQLKAMKRRQRFEQPRQRKLLKQSAGRVAEDEEEQEEAQGDDMRDVDFRLRFDPR 766
                                 ||.||                ..:.....|:|:.:.        
 Frog  1185 ---------------------FECPR----------------FVEPNGLSDNMKALS-------- 1204

  Fly   767 QLALLERSSRLDRHSVVVLLKLLLGSGFYPQLA---------ISDEF----NYCKGGGQQFFHTR 818
                .|.:|         |||.:|.:|.|..:.         |:::.    ...:|..|      
 Frog  1205 ----AEETS---------LLKAILTAGLYDNVGKILFTNSVDITEKLACMVETAQGKAQ------ 1250

  Fly   819 LKPFVLQHPNSQFAKHFELLKLTESDLLPKPDFYTPKLPLSKRHQLLCYQSLLETAKPYLINCIR 883
                  .||:|           ...||              :.:..|.||..::.:|.:|... .
 Frog  1251 ------VHPSS-----------VNRDL--------------QTYGWLLYQEKIKYSKVFLRES-T 1283

  Fly   884 LPAAQTLLLFSFAIDTNAGITQIACDGWLGLDLPMPGSGMELLRRAIELRRRWSRLLYDKLDDLK 948
            |.....:|||...|........:..|.|:....|:          .|.:..:..|:|.:.:  ||
 Frog  1284 LITPFPVLLFGGDIAVQHRERLLTVDDWIHFQAPV----------KIAVIFKELRVLIESV--LK 1336

  Fly   949 SKQESPSHS-SDDRSSALWQDLV 970
            .|.|:|..| .||...::.::|:
 Frog  1337 KKLENPKMSLQDDTILSIIKELI 1359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 75/184 (41%)
DEXDc 163..298 CDD:238005 64/147 (44%)
Helicase_C 358..490 CDD:278689 51/139 (37%)
HA2 560..640 CDD:214852 26/79 (33%)
OB_NTP_bind <792..897 CDD:285018 19/117 (16%)
dhx29XP_004910409.1 HrpA 556..1281 CDD:224557 231/845 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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