DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32533 and dhx34

DIOPT Version :9

Sequence 1:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_001121459.1 Gene:dhx34 / 100158553 XenbaseID:XB-GENE-1009178 Length:1133 Species:Xenopus tropicalis


Alignment Length:1176 Identity:489/1176 - (41%)
Similarity:699/1176 - (59%) Gaps:114/1176 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TQINLIEFSFLDHKAELVGLLQAKSRQVGRSLVENEADFWKFVGKYEAM--MRSTGQ-------- 72
            |:..|.|..|.:.     |.::|.|        |:..:||.|..:::..  |:..|.        
 Frog    17 TRRQLEELFFSEQ-----GYIKANS--------EDSKEFWVFFDRFQRFQKMQKRGDKCKGRTDK 68

  Fly    73 -----------PVLPPRL-AEAELSSMQPYHRSKHLALRLDADELLQEARDQMQSQFRHILLVYL 125
                       .|..||. ....:...:...:|:|..::.......:....:...:|:..:|.||
 Frog    69 EKYSGSLKDLPKVYDPRYRINFSIIQSKDVEKSRHNHVKEYRSRDCRSIPREKLEEFKMSVLHYL 133

  Fly   126 DFRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS 190
            ||.|.:.|.::.|||:.:.:|||.::::.:...:...:||:|||||||||||||||||...|:..
 Frog   134 DFTQKQSFAKLVKLRKERSSLPIFQYKEKIISMVHKHQVVVVAGDTGCGKSTQVPQYLLAAGFGH 198

  Fly   191 IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLD 255
            ||||||||:||:||.|||..|.|:.|||:|.:|||||.||:..|.|:||||||||||:...:.|.
 Frog   199 IACTQPRRIACISLAKRVGFESLNQYGSKVGYQIRFESSRSPATKIVFITEGLLLRQIQRDSTLP 263

  Fly   256 QYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGR 320
            ||..:|:||:|||:|..||||||.:.||..||.||:||||||||::||.|||  |.|.::|||||
 Frog   264 QYQVIIVDEVHERHLHSDFLLGVLRQLLILRPDLKVILMSATINIKLFSGYF--EQAPVLQVPGR 326

  Fly   321 LFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEI 385
            ||||::.|.|.|..|      |..:|:  ::||.|::.||..||.:||..||||:|||:|||.||
 Frog   327 LFPIQVIYQPIPQEE------TVSKSE--KLDPRPYLHVLQAIDHKYPPDERGDLLIFLSGVTEI 383

  Fly   386 ESVVEAVHEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVV 450
            .||.|||..|||....|:||||||..:||||.||||.||.|:||||:||||||||:|:||||||:
 Frog   384 SSVQEAVQVYATHTQRWIVLPLHSTLSIADQDKVFDLAPVGVRKCIISTNIAETSVTIDGVRFVL 448

  Fly   451 DSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPEIY 515
            ||||||||:||...|.|||:|||:|::||:||||||||||||||:|||....|:||..||.|||.
 Frog   449 DSGKVKEMSFDPKAKMQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQ 513

  Fly   516 RVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVE 580
            ||.||:::|||.||.|.:.|.|||||.|....||..|..|:...||.:.|::||:|:.||.|||:
 Frog   514 RVALDSLVLQMKSMELGNPRHFPFIEQPSMSSIETAIFYLRDQGALDINEELTPIGKLLAKLPVD 578

  Fly   581 LSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNV 645
            :.|||||::||:|..||.:||:|:.||||:|:...:.::......|:.|||:|||.|||:.::|.
 Frog   579 VVIGKMLILGSLFSLVEPVLTIASALSVQSPILRNSTSNPEWGTARKPLESEHGDPFTLLNIFNE 643

  Fly   646 WVQLKM-RRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMV---VASDSDSQLTSAERAT 706
            |||:|. :|..:|:||||.|:||||.||:..||:||:.:|:..|::   ||...|..    .|..
 Frog   644 WVQVKANQRSNSRKWCRRRGLEEQRLYEMANLRRQFKELLKDHGLLEENVAQRGDRN----SRQR 704

  Fly   707 RHGELRQLKAMKRRQRFEQPRQRKLLK---QSAGRVAEDEEE-------QEEAQGDDMRDVDFRL 761
            :|.|.::|..:||:....:.|:||:||   :.||..::.||:       ::.....|::||.|:|
 Frog   705 QHKERKELHQLKRQHERVEKRKRKVLKLQDEGAGSSSDGEEQYHTEKHRKDRKDSIDIQDVKFKL 769

  Fly   762 RFDPRQLALLERSSRLDRHSVVVLLKLLLGSGFYPQLAISDEFNYCKGGGQQFFHTRLKPFVLQH 826
            |.:..:|.....:.:......|.||||::..|.||||.:.|.||.|:....|.|||:.|..|:.|
 Frog   770 RHNIHELHASSSTGQDLSSQEVSLLKLIVCHGLYPQLGVPDSFNSCRKDSDQVFHTKNKQGVVLH 834

  Fly   827 PNSQFAKHFELLKLTESDLLPKPDFYTPKLPLSKRHQLLCYQSLLETAKPYLINCIRLPAAQTLL 891
            |...|:.:.|||::...:  ......:.....|.|||::.:.|||||.||||:||:||.|.|..|
 Frog   835 PTCVFSCNPELLQVNSEE--ESAGNESGNKGQSSRHQIVAFVSLLETNKPYLVNCVRLSALQGFL 897

  Fly   892 LFSFAIDTNAGITQIACDGWLGLDLPMPGSGMELLRRAIELRRRWSRLLYDKLDDLKSKQESPS- 955
            |.:..|||:|...:|.||.|:.:::..|.|.:.|:..|::|     |:..:||  |||:.|.|| 
 Frog   898 LLARCIDTSADCCRIVCDKWMEMNVDNPESALCLITEAVQL-----RVALEKL--LKSRLEKPSR 955

  Fly   956 ---HSSDDRSSA------LWQDLVDYMALDVAYAIRRLLPADIKRLYT-HQAPSARL-------- 1002
               |:.||..:|      |.:.||||:..:..|::|||...:.:.||. .|..|:..        
 Frog   956 REDHTEDDAWTARQEAERLGRRLVDYVRPEAIYSMRRLAALEAQNLYVGPQVLSSASGLPGVFTG 1020

  Fly  1003 AELKENPFAVDFPMTPNEEKGGLNVSEHVVYSCLAEQQWTTAMDATLRAEPWQCTRCDFELEEFD 1067
            .|||.:|.           |||.:|:..:.|:|||.:  |......||:. |.|..|...: .|.
 Frog  1021 VELKPDPL-----------KGGYSVTNFLTYNCLASE--TDFYSDCLRSF-WTCPHCGLYM-PFT 1070

  Fly  1068 VLEQLVHRSKCKRRKAQESRTAKTTSTESSTEVASSSSSHSSGGYYCNSCKRELRLTTIDILRHK 1132
            .:|::.|::.|...:..|.      ..|...::.|.:|.|.:  |:|:.|:::|.||..:||:||
 Frog  1071 PMERMSHQNSCMVEETSEG------LGEQDNKMTSVTSLHRN--YHCDICQKDLMLTPTEILKHK 1127

  Fly  1133 KQCRNN 1138
            :|..|:
 Frog  1128 RQHLNS 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 106/171 (62%)
DEXDc 163..298 CDD:238005 87/134 (65%)
Helicase_C 358..490 CDD:278689 91/131 (69%)
HA2 560..640 CDD:214852 38/79 (48%)
OB_NTP_bind <792..897 CDD:285018 42/104 (40%)
dhx34NP_001121459.1 DEXDc 149..329 CDD:214692 106/181 (59%)
DEXDc 171..306 CDD:238005 87/134 (65%)
HELICc 402..488 CDD:197757 64/85 (75%)
HA2 557..638 CDD:214852 38/80 (48%)
OB_NTP_bind 762..903 CDD:285018 53/142 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 258 1.000 Domainoid score I1964
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69171
Inparanoid 1 1.050 826 1.000 Inparanoid score I451
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 1 1.000 - - FOG0006245
OrthoInspector 1 1.000 - - oto105429
Panther 1 1.100 - - LDO PTHR18934
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4527
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

Return to query results.
Submit another query.