DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment narya and Rnf212

DIOPT Version :10

Sequence 1:NP_573383.1 Gene:narya / 32932 FlyBaseID:FBgn0031018 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_003751367.2 Gene:Rnf212 / 689721 RGDID:1588767 Length:307 Species:Rattus norvegicus


Alignment Length:209 Identity:55/209 - (26%)
Similarity:91/209 - (43%) Gaps:55/209 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VHCNKCFR--HRKTDPAVPFHLTQCRHVICGPCLGQSSLEKN-CPLCGQVLKAIQINRDMPTSVA 65
            |.||:||:  |||:.    |.||.|.||.|..|:.:.  :|| |.:|....:.:.:::...::|.
  Rat     5 VFCNRCFQPPHRKSS----FSLTSCGHVFCDSCILKG--KKNECMICEVPCQTVLLSKHTNSNVQ 63

  Fly    66 NYFAD----PLRFQQIYRKISKFQADQRASDNLGFYRQ-LQQLEQNKRQLEGFCKMEAQLNQKVV 125
            .:|.|    ..::.|...:||:||...|.. .:.|||: :.|||::.|              |.|
  Rat    64 TFFLDIDGLCKKYSQEISQISEFQEKHRRR-LVTFYREKISQLEESLR--------------KSV 113

  Fly   126 EEKKRIAELRTYIAYHENAQRMTRRRHSAGERFHTPEFKEAWNTSISTSDKSPSDMPSDSSR--- 187
            .:.|::..:|       ::|:              |.|....| |:||.......:|.:||.   
  Rat   114 LQIKQLQSMR-------SSQQ--------------PAFNTIKN-SVSTKPNGYIFLPPNSSLPDR 156

  Fly   188 -RSADLDTQSTRRR 200
             .|.|:|..|..|:
  Rat   157 IESMDIDLTSPARK 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
naryaNP_573383.1 zf-RING_5 5..49 CDD:434085 19/46 (41%)
Rnf212XP_003751367.2 RING-HC_RNF212 4..50 CDD:438404 20/50 (40%)

Return to query results.
Submit another query.