DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment narya and Rnf212b

DIOPT Version :10

Sequence 1:NP_573383.1 Gene:narya / 32932 FlyBaseID:FBgn0031018 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_017455365.1 Gene:Rnf212b / 102550789 RGDID:7500178 Length:297 Species:Rattus norvegicus


Alignment Length:209 Identity:47/209 - (22%)
Similarity:90/209 - (43%) Gaps:43/209 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQSSLEKNCPLCGQVLKAIQINRDMPTSVANYFA 69
            |||:|||    .....|.:|.|.|:.|..|:   :||| |.:||:..|.:.::.::......:|.
  Rat     5 HCNQCFR----KDGAHFFVTSCGHIFCKKCM---TLEK-CGVCGRPCKHLALSDNLKPQEKKFFK 61

  Fly    70 DPLRFQ-QIYRKISKFQADQRASDNL--GFYR-QLQQLEQNKRQLEGFCKMEAQLNQKVVEEKKR 130
            .|:... |.:..:::....|:...:|  .||: :::.||...::.:   :..|..|:::...:|.
  Rat    62 SPVETAVQCFSHVAQVWCFQKKQTDLLIAFYKDRIRNLEAAVKEAQ---ETAASQNKELSVLRKE 123

  Fly   131 IAELRTYIA--------YHENAQRMTRRRHSAGERFHTPEFKEAWNTSISTSDKSPSDMPSDSSR 187
            ..||:..:|        |:             |.|..||.       .:..:..|.|..|..||:
  Rat   124 NGELKKILAILKGSPSCYY-------------GNRLTTPR-------PVGITSPSQSAAPRPSSQ 168

  Fly   188 RSADLDTQSTRRRS 201
            .|:.:.::|:...|
  Rat   169 HSSQVVSRSSSMES 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
naryaNP_573383.1 zf-RING_5 5..49 CDD:434085 17/43 (40%)
Rnf212bXP_017455365.1 RING-HC_RNF212B 4..40 CDD:438405 16/42 (38%)

Return to query results.
Submit another query.