DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek5 and lrit3a

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:592 Identity:130/592 - (21%)
Similarity:203/592 - (34%) Gaps:153/592 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RLGMILLLLGVLVVLMALPPPTAGTTDWMQSCGTCHCQWN-----SGKKSADCKNKALTKIPQDM 71
            ||.:..:|||...|.....|            ..|.|.::     :|.:|..|.:..::.||.::
Zfish     3 RLLVAQVLLGCWSVAQPFCP------------SQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNV 55

  Fly    72 SNEMQVLDFAHNQIPELRREEFLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIR 136
            .     ||..                     |:.:....::.|..|||..|..|..|.::.|.|.
Zfish    56 P-----LDTV---------------------KLRVEKTAVRRVPTEAFYYLSELRYLWITYNSIT 94

  Fly   137 ELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAIS 201
            .:.||:|..|:.|..:.::.|.|...|......:..|..::..||||..|.:......:.::.:.
Zfish    95 SVDPGSFYNLKVLHELRLDGNMIATFPWESLKEMPSLKTLDLHNNRLTSVPVEAAPYLINITYLD 159

  Fly   202 LEQNRLSHLHKE------TFKDLQKLMH------LSLQGNAWNCSCELQDFRDFAISKRLYTPPT 254
            :..|:|:.|..:      .|..:|...:      |.||.|.|.|.|.:...  ..:||....|..
Zfish   160 ISSNKLTTLPSDLVDIWPPFSGIQPSANTSQKTVLGLQDNPWYCDCRISKL--IELSKMAGIPVV 222

  Fly   255 ------DCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFIEANHDNISLPCRIVGSPRPNVTWV 313
                  .|..|..|.|.|:.....:. ..:|.::.|..........|:.|.|...|.|.|.:.|.
Zfish   223 LMDQVLTCSGPEHLSGVLFQRAELDQ-CVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWT 286

  Fly   314 YNKRPLQQYDPRVRVLTSVEQMPEQPSQVLTSELRIVGVRASDKGAYTCVADNRGGRAEAEFQLL 378
                   ..|..|...|.|::.|.:  .|..|.|.:..:...|.|.|.|.|.|..|.|||...|.
Zfish   287 -------TADGSVVNNTVVQESPGE--GVRWSILSLHSIVFKDAGDYRCKAKNVAGNAEAYITLS 342

  Fly   379 VSGDYAGAVSASDGMGMGAIGAPTIDPQTNMFLIICLIITTLLLLLLVAVLTLFWYCRRIKTYQK 443
            |.|     |..:.......|.....|..|..|     ..|.:.|...::.:|       |.|...
Zfish   343 VDG-----VQPTTPFPPINITKQPEDQPTTTF-----TPTKMPLFTSLSPIT-------ITTRPV 390

  Fly   444 DTTM---------MSGDGLISS--------KMDKTHNGSMLEGSVIMEMQKSLLNEVNPVEKP-- 489
            .|||         :.|.|:..|        |:.::.||   :||:    :||.:.::..||:.  
Zfish   391 MTTMPPLTTRKSPIPGGGVQRSPPAGDKPAKVQQSKNG---KGSI----KKSDIRDIEVVEETTE 448

  Fly   490 -----------PRRTDIESV----DGGDDVLEIKKT--------------LLDDTVY----VANH 521
                       |..|.:..|    |..||    |:|              |:.:.||    |...
Zfish   449 TAVLLWSAEGLPSDTPLTVVYFPYDAKDD----KETVDTEVGQGKLLLEYLMPNQVYTVCLVTKS 509

  Fly   522 SRDEEAV 528
            |..|:.|
Zfish   510 SGKEQCV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 18/83 (22%)
leucine-rich repeat 76..100 CDD:275380 2/23 (9%)
LRR_8 99..159 CDD:290566 16/59 (27%)
leucine-rich repeat 101..124 CDD:275380 6/22 (27%)
LRR 122..145 CDD:197688 8/22 (36%)
leucine-rich repeat 125..148 CDD:275380 8/22 (36%)
LRR_8 148..207 CDD:290566 11/58 (19%)
leucine-rich repeat 149..172 CDD:275380 4/22 (18%)
leucine-rich repeat 173..196 CDD:275380 6/22 (27%)
LRR_8 197..>229 CDD:290566 8/43 (19%)
leucine-rich repeat 197..220 CDD:275380 4/28 (14%)
LRRCT 229..277 CDD:214507 12/53 (23%)
Ig 296..376 CDD:143165 24/79 (30%)
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 15/59 (25%)
leucine-rich repeat 83..106 CDD:275378 8/22 (36%)
LRR_4 107..145 CDD:289563 9/37 (24%)
leucine-rich repeat 107..130 CDD:275378 4/22 (18%)
LRR_8 129..>171 CDD:290566 9/41 (22%)
LRR_4 129..170 CDD:289563 9/40 (23%)
leucine-rich repeat 131..154 CDD:275378 6/22 (27%)
leucine-rich repeat 155..168 CDD:275378 2/12 (17%)
TPKR_C2 199..249 CDD:301599 12/52 (23%)
Ig 252..343 CDD:299845 28/99 (28%)
IG_like 261..343 CDD:214653 26/90 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I5089
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.