DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek5 and Lrit2

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_001178867.1 Gene:Lrit2 / 498594 RGDID:1564668 Length:549 Species:Rattus norvegicus


Alignment Length:572 Identity:134/572 - (23%)
Similarity:211/572 - (36%) Gaps:106/572 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 CHCQWNSGKKSADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREEFLLAGLPNVHKIFLRNCT 110
            |.|...|..:|..|.:.:|.|||.:....::.:....:.:.||.:..|  ..|..:..::|....
  Rat    28 CTCSEESFGRSLQCMSMSLGKIPDNFPEGLKQVRIEKSPLFELPQGVF--TNLNTLEYLWLNFNN 90

  Fly   111 IQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSFLSR 175
            :..:|..|.:.|..|.||.|.|||:|.:....|.....||.:.:.:|.|:.||......|:.|:.
  Rat    91 VTVIHLGALEDLPQLRELRLEGNRLRSVPWTAFRATPFLRVLDLKHNRIDALPELALQFLANLTY 155

  Fly   176 IEFRNNRLRQVQLHVFAGTMALSAISLEQNR---------LSHLHKETFKDLQKLMHLSLQGNAW 231
            ::..:|||..|...||....|.      |.|         |||            |.|||..|.|
  Rat   156 LDISSNRLTVVSKGVFLNWPAY------QKRQQLGCGAEILSH------------MVLSLHNNPW 202

  Fly   232 NCSCELQDFRDFAISKRLYTPP-------TDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFI 289
            .|.|.|.....|..|   ..||       ..||.|....|:|..|  :|...|...|:.:..:.:
  Rat   203 LCDCRLTGLAQFVKS---VGPPFILVNSYLICQGPVSKAGQLLHE--TELGDCMKPIISTPSANV 262

  Fly   290 EAN-HDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEQMPEQPSQVLTSELRIVGVR 353
            ... ..|::|.|....||.|.:.|.|.....:::|        |..:|.....:| |:|.|...:
  Rat   263 SIQVGKNVTLQCLAQASPSPTIEWKYPLSTWRKFD--------VLALPVAEGFIL-SQLVIPAAQ 318

  Fly   354 ASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSASDGMGMGAIGAPTIDPQTNMFLIICLIIT 418
            ..|...|||:|.|..||:.....|.|..  |.|......:...:.|:..:|        :.::..
  Rat   319 LVDGTNYTCMASNSIGRSSLVITLYVQP--AQATPGLHSLSTSSEGSSYVD--------LRVVKQ 373

  Fly   419 TL--LLLLLVAVLTLF---WYCRRIKTYQKDTTMMSGDGLISSKMDKTHNGSMLEGSVIMEM--- 475
            |:  :||..:.|..|.   |:          |..::.|..:..|:  .|.|..:....:.::   
  Rat   374 TVHGILLEWLTVTNLAGEQWF----------TLYIASDEALEKKV--VHIGPGINTYAVDDLLPA 426

  Fly   476 --QKSLLNEVNPVEKPPRRTD-IESVDG-GDDVLEIKKTLLDDTVYVANHSRDEEAVSVAMSDTT 536
              .|:.|...|   :||.:.. :..|.| |...||.::.||..||.:.       ||.:|:    
  Rat   427 TKYKACLGLRN---QPPGQGQCVVFVTGKGSGELEGREHLLHVTVVLC-------AVLLAL---- 477

  Fly   537 TTPRSRHTYVDDAYANSLPPDLLAFP-----ARVPPTSPSMQSSQSNIPDQV 583
              |...:.:......|........||     .|.|...|..:.:....|..|
  Rat   478 --PVGAYVWATQGPCNCSEWCFRCFPLHRKTLRCPQAVPQCKDNSFTDPSAV 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 20/83 (24%)
leucine-rich repeat 76..100 CDD:275380 4/23 (17%)
LRR_8 99..159 CDD:290566 16/59 (27%)
leucine-rich repeat 101..124 CDD:275380 4/22 (18%)
LRR 122..145 CDD:197688 10/22 (45%)
leucine-rich repeat 125..148 CDD:275380 9/22 (41%)
LRR_8 148..207 CDD:290566 17/67 (25%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 7/22 (32%)
LRR_8 197..>229 CDD:290566 9/40 (23%)
leucine-rich repeat 197..220 CDD:275380 5/31 (16%)
LRRCT 229..277 CDD:214507 16/54 (30%)
Ig 296..376 CDD:143165 22/79 (28%)
Lrit2NP_001178867.1 LRR_8 56..115 CDD:290566 14/60 (23%)
leucine-rich repeat 57..80 CDD:275378 4/24 (17%)
LRR_4 81..119 CDD:289563 12/37 (32%)
leucine-rich repeat 81..104 CDD:275378 4/22 (18%)
LRR_8 103..163 CDD:290566 18/59 (31%)
leucine-rich repeat 105..128 CDD:275378 9/22 (41%)
LRR_4 129..164 CDD:289563 10/34 (29%)
leucine-rich repeat 129..152 CDD:275378 7/22 (32%)
leucine-rich repeat 153..164 CDD:275378 3/10 (30%)
leucine-rich repeat 177..204 CDD:275378 11/44 (25%)
TPKR_C2 200..243 CDD:301599 14/45 (31%)
I-set 253..344 CDD:254352 25/99 (25%)
Ig 270..341 CDD:143165 22/79 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BAUD
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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