DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek5 and rtn4rl1b

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_982347.1 Gene:rtn4rl1b / 403308 ZFINID:ZDB-GENE-040310-3 Length:478 Species:Danio rerio


Alignment Length:523 Identity:115/523 - (21%)
Similarity:182/523 - (34%) Gaps:154/523 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RSGRRLGMILLLLGVLVVLMALPPPTAGTTDWMQSCGTCHCQWNSGKKSADCKNKALTKIPQDMS 72
            :.|..|..:|:|.|:             ...|  ||.. ||.......:..|:......:|:.:.
Zfish     3 KRGCGLEFLLVLCGL-------------ELSW--SCPR-HCICYMAPSTVSCQAHNFLSVPEGIP 51

  Fly    73 NEMQVLDFAHNQIPELRREEFLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNR-IR 136
            ...:.:...:|:|..|.:..|    .|....:::.:..|..:....|:|..:|.||||..|| :|
Zfish    52 PHSERIFLQNNKIHRLLQGHF----SPTTVTLWIYSNNITYIEPSTFQGFTLLEELDLGDNRYLR 112

  Fly   137 ELHPGTFAGL---------------------EKLRN---VIINNNEIEVLPNHLFVNLSFLSRIE 177
            .|...||.||                     :.|||   :.:.:|.:|.|.:.|||:|..||.:.
Zfish   113 SLSAETFHGLGRLHALHLYRCGLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLF 177

  Fly   178 FRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETFKDLQKLM-------------------- 222
            ...|||..:..:.|.|..||..:.|..|:|..:.:..|.||::|.                    
Zfish   178 LHGNRLWSLHQNTFRGLGALDRLLLHHNQLQWVDRLAFHDLRRLTTLYLFNNSLTELAGECLTQL 242

  Fly   223 ----HLSLQGNAWNCSCELQDFRDFAISKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRILG 283
                :|.|..|.|.|.|:.....|:....|..|....|..|.:|.||...::..|:|   |...|
Zfish   243 PALEYLRLNDNPWECDCKALSLWDWLKKFRGSTSSVGCVAPAELAGKDLKQLRKEDF---PNCSG 304

  Fly   284 SVRSFIEANHDNISLPCRIVGSPRPNVTWV-YNKRPLQQ------------YDPRVRVLTSVEQM 335
            |     |:.|.:           :.| ||. .||..|:|            :.|::.     ||.
Zfish   305 S-----ESLHQS-----------KTN-TWAGTNKVSLKQEPHPAQPPQTHPHHPQLN-----EQF 347

  Fly   336 PEQPSQVLTSELRIVGVRASDKGAYTCVADNRGGR--------------------------AEAE 374
            |..||.:......|.||:.....:...:.|.|.||                          |:.|
Zfish   348 PSPPSPLPQPPPAINGVQVVPGVSPDMIPDQRPGRSRNCTRQRVRGSKGKGPNEVHILKEMADKE 412

  Fly   375 FQLLVSGDYAGAVSASDGMGMG-----------AIGAPT-IDPQTNM------FLIICLIITTLL 421
            :.   |.|:.|....:...|..           ::..|: :...||:      .|.:|.|...|.
Zfish   413 YS---SPDFTGKYDETSSNGSNTRRKHKCTPRTSVRPPSGVQQATNLGHSHHTHLFLCSISGLLT 474

  Fly   422 LLL 424
            |:|
Zfish   475 LIL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 25/108 (23%)
leucine-rich repeat 76..100 CDD:275380 4/23 (17%)
LRR_8 99..159 CDD:290566 21/84 (25%)
leucine-rich repeat 101..124 CDD:275380 3/22 (14%)
LRR 122..145 CDD:197688 11/23 (48%)
leucine-rich repeat 125..148 CDD:275380 13/44 (30%)
LRR_8 148..207 CDD:290566 21/61 (34%)
leucine-rich repeat 149..172 CDD:275380 10/25 (40%)
leucine-rich repeat 173..196 CDD:275380 7/22 (32%)
LRR_8 197..>229 CDD:290566 10/55 (18%)
leucine-rich repeat 197..220 CDD:275380 7/22 (32%)
LRRCT 229..277 CDD:214507 14/47 (30%)
Ig 296..376 CDD:143165 22/118 (19%)
rtn4rl1bNP_982347.1 leucine-rich repeat 35..56 CDD:275380 2/20 (10%)
LRR_8 52..109 CDD:290566 13/60 (22%)
leucine-rich repeat 57..75 CDD:275380 4/21 (19%)
leucine-rich repeat 77..99 CDD:275380 3/21 (14%)
LRR_RI 100..>254 CDD:238064 41/153 (27%)
LRR_8 100..159 CDD:290566 17/58 (29%)
leucine-rich repeat 100..124 CDD:275380 13/23 (57%)
leucine-rich repeat 125..148 CDD:275380 1/22 (5%)
LRR_8 147..207 CDD:290566 20/59 (34%)
LRR_4 148..186 CDD:289563 13/37 (35%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 7/22 (32%)
LRR_8 197..254 CDD:290566 10/56 (18%)
leucine-rich repeat 197..220 CDD:275380 7/22 (32%)
leucine-rich repeat 221..244 CDD:275380 1/22 (5%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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