DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek5 and Amigo3

DIOPT Version :10

Sequence 1:NP_573382.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_796249.1 Gene:Amigo3 / 320844 MGIID:2444854 Length:508 Species:Mus musculus


Alignment Length:504 Identity:108/504 - (21%)
Similarity:150/504 - (29%) Gaps:196/504 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLLLGVLVVLM-----------ALPPPTAGTTDWMQSCGTCHCQWNSGKKSAD---CKNKALTKI 67
            |:|.|:|:.::           .|||......|      .|.|       :||   |..:.|..:
Mouse     4 LVLSGILLCMLGAGLGTSDLEDVLPPAPHNCPD------ICIC-------AADVLSCAGRGLQDL 55

  Fly    68 PQDMSNEMQVLDFAHNQIPELRREEFLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSG 132
            |                           ..||..                       ..|||||.
Mouse    56 P---------------------------VALPTT-----------------------AAELDLSH 70

  Fly   133 NRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMAL 197
            |.::.||||..|.|.:||.:.:..|::|||.:..|.|.|.|..::..:|.||.:..|...|...|
Mouse    71 NALKRLHPGWLAPLSRLRALHLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEEL 135

  Fly   198 SAISLEQNRLSHLHKETFKDLQKLMHLSLQGNAWNCSCELQDFR---------------DFA--- 244
            ..:.|..|.|.||..:.|:.|:.|.||.|..|      ||..|.               |.:   
Mouse   136 EKLLLFNNSLMHLDLDAFQGLRMLSHLYLSCN------ELSSFSFNHLHGLGLTRLRTLDLSSNW 194

  Fly   245 ---------------ISKRLY---TP-PTDCQEPPQLRGKLWSEVP-------SENFAC------ 277
                           :..|||   .| |.||.....||  .|.:..       ...:.|      
Mouse   195 LKHISIPELAALPTYLKNRLYLHNNPLPCDCSLYHLLR--RWHQRGLSALHDFEREYTCLVFKVS 257

  Fly   278 --RPRILGSVRSF--------------IEANHDNISLPCRI---VGSPRPNVTWVYNKRPL---- 319
              |.|.....|.|              .|..|..:....|:   ...|...|.||..|..|    
Mouse   258 ESRVRFFEHSRVFKNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAP 322

  Fly   320 QQYDPRVRVLTSVEQMPEQPSQVLTSELRIVGVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYA 384
            ...|..:.||..             ..|.|..|:....|.:.|:|.  |.|......|    :|.
Mouse   323 ASQDGSIAVLAD-------------GSLAIGRVQEQHAGVFVCLAS--GPRLHHNQTL----EYN 368

  Fly   385 GAVSASDGMGMGAIGAPTIDPQTNMF------LIICLIITTLLLLLLVA 427
            .:|..:             .|:...|      |:.|::...|:||.|.|
Mouse   369 VSVQKA-------------RPEPETFNTGFTTLLGCIVGLVLVLLYLFA 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_573382.1 LRR <76..>229 CDD:443914 41/152 (27%)
leucine-rich repeat 76..100 CDD:275380 1/23 (4%)
leucine-rich repeat 101..124 CDD:275380 0/22 (0%)
leucine-rich repeat 125..148 CDD:275380 12/22 (55%)
leucine-rich repeat 149..172 CDD:275380 8/22 (36%)
leucine-rich repeat 173..196 CDD:275380 6/22 (27%)
leucine-rich repeat 197..220 CDD:275380 8/22 (36%)
LRRCT 229..277 CDD:214507 15/91 (16%)
Ig 296..379 CDD:472250 19/89 (21%)
Ig strand B 296..300 CDD:409353 0/3 (0%)
Ig strand C 309..313 CDD:409353 1/3 (33%)
Ig strand E 345..349 CDD:409353 1/3 (33%)
Ig strand F 359..364 CDD:409353 1/4 (25%)
Ig strand G 372..375 CDD:409353 0/2 (0%)
Amigo3NP_796249.1 leucine-rich repeat 44..61 CDD:275380 4/43 (9%)
LRR 1 62..83 10/43 (23%)
LRR <65..>221 CDD:443914 47/161 (29%)
leucine-rich repeat 65..86 CDD:275380 12/20 (60%)
LRR 2 86..107 7/20 (35%)
leucine-rich repeat 87..110 CDD:275380 8/22 (36%)
LRR 3 110..133 6/22 (27%)
leucine-rich repeat 111..134 CDD:275380 6/22 (27%)
LRR 4 134..155 7/20 (35%)
leucine-rich repeat 135..158 CDD:275380 8/22 (36%)
LRR 5 158..178 8/25 (32%)
leucine-rich repeat 159..184 CDD:275380 8/30 (27%)
LRR 6 184..207 1/22 (5%)
leucine-rich repeat 185..209 CDD:275380 1/23 (4%)
Ig_3 279..355 CDD:464046 17/88 (19%)

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