DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek5 and Lgi2

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_001100689.2 Gene:Lgi2 / 305417 RGDID:1310391 Length:542 Species:Rattus norvegicus


Alignment Length:556 Identity:113/556 - (20%)
Similarity:198/556 - (35%) Gaps:172/556 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RSGRRLGMILLLLGVLVVLMALPPPTAGTTDWMQSCGTCHCQWNSGKKSADCKNKALTKIPQDMS 72
            |.|..||::||....|:      ||:|......:...||.|.    |:|..|...:.  :|:.:.
  Rat     5 RGGGALGLLLLSAACLI------PPSAQVRRLARCPATCSCT----KESIICVGSSW--VPRIVP 57

  Fly    73 NEMQVLDFAHNQIPELRREEFLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRE 137
            .::..|...:....|::...|  :.||::..:.|.:.:...:..:||.||..|..|.:.||:|..
  Rat    58 GDISSLSLVNGTFLEIKDRMF--SHLPSLQLLLLNSNSFTVIRDDAFAGLFHLEYLFIEGNKIET 120

  Fly   138 LHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISL 202
            :....|.||..|.::.:.||.|:.||                                       
  Rat   121 ISRNAFRGLRDLTHLSLANNHIKALP--------------------------------------- 146

  Fly   203 EQNRLSHLHKETFKDLQKLMHLSLQGNAWNCSCELQDFRDFAISKRLY-------TPPTD--CQE 258
                     ::.|.||..|:.|.|:||.:.|.|:         :|.||       :..:|  |..
  Rat   147 ---------RDVFSDLDSLIELDLRGNKFECDCK---------AKWLYLWLKMTNSTVSDVLCIG 193

  Fly   259 PPQLRGKLWSEVPSENFACR----------PRILGSVRSFIEANHDNISLP------CRIVGSPR 307
            ||:.:.|..::|.|.::.|.          |....||.:|...|...:::.      |.:     
  Rat   194 PPEYQEKKLNDVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMV----- 253

  Fly   308 PNVTWVYNKRPLQQYDPRVRVLTSVEQMPEQPSQVLTSELRIVGVRA--SDKGAYTCVADNRGGR 370
              :.|.:.:...:.||.                  :|.: .|||.:|  .|...:..||...||.
  Rat   254 --LEWDHIEMNFRSYDN------------------ITGQ-SIVGCKAILIDDQVFVVVAQLFGGS 297

  Fly   371 AEAEFQLLVSGDYAGAVSASDGMGMGAIGAPT------IDPQTNMFLIICLIITTLLLLLLVAVL 429
            ...::    ...:...|...| :.:..|..|.      ||.:|  |.||.....       ..:.
  Rat   298 HIYKY----DESWTKFVKFQD-IEVSRISKPNDIELFEIDDET--FFIIADSSK-------AGLS 348

  Fly   430 TLF-WYCRRIKTYQK--------DTTMMSGDGLISSKMDKTH--NGSMLEGSVIMEMQKSLLNEV 483
            |:: |..:...:||.        |...:..||       |:|  ..|..:..:|::..||     
  Rat   349 TVYKWSSKGFYSYQSLHEWFRDTDAEFVDIDG-------KSHLILSSRSQVPIILQWNKS----- 401

  Fly   484 NPVEKPPRRTDIESVDGGDDVLEIKKTLLDDTVYVA 519
              .:|.....||.::   :|||.:|...:.:|:|::
  Rat   402 --SKKFVPHGDIPNM---EDVLAVKSFRMQNTLYLS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 21/83 (25%)
leucine-rich repeat 76..100 CDD:275380 4/23 (17%)
LRR_8 99..159 CDD:290566 17/59 (29%)
leucine-rich repeat 101..124 CDD:275380 5/22 (23%)
LRR 122..145 CDD:197688 7/22 (32%)
leucine-rich repeat 125..148 CDD:275380 8/22 (36%)
LRR_8 148..207 CDD:290566 6/58 (10%)
leucine-rich repeat 149..172 CDD:275380 6/22 (27%)
leucine-rich repeat 173..196 CDD:275380 0/22 (0%)
LRR_8 197..>229 CDD:290566 6/31 (19%)
leucine-rich repeat 197..220 CDD:275380 3/22 (14%)
LRRCT 229..277 CDD:214507 13/56 (23%)
Ig 296..376 CDD:143165 14/87 (16%)
Lgi2NP_001100689.2 LRR_8 107..166 CDD:404697 22/106 (21%)
leucine-rich repeat 108..131 CDD:275378 8/22 (36%)
leucine-rich repeat 132..155 CDD:275378 9/70 (13%)
PCC 137..>212 CDD:188093 25/131 (19%)
leucine-rich repeat 156..168 CDD:275378 5/11 (45%)
EPTP 216..255 CDD:397689 6/45 (13%)
EPTP 263..301 CDD:397689 12/56 (21%)
EPTP 308..352 CDD:397689 11/53 (21%)
EPTP 404..444 CDD:397689 9/32 (28%)
EPTP 449..488 CDD:397689
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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