DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek5 and Flrt2

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_001100220.1 Gene:Flrt2 / 299236 RGDID:1308574 Length:660 Species:Rattus norvegicus


Alignment Length:723 Identity:135/723 - (18%)
Similarity:220/723 - (30%) Gaps:267/723 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ILLLLGV---LVVLMALPPPTAGTTDWMQSCGTCHCQWNSGKKSADCKNKALTKIPQDMSNEMQV 77
            :::.||:   :..|:|.|             ..|.|..|    ...|..::||.:|..:...:.|
  Rat    20 LIMSLGLYSHVSKLLACP-------------SVCRCDRN----FVYCNERSLTSVPLGIPEGVTV 67

  Fly    78 LDFAHNQI------PELRR--------------EEFLLAGLP-NVHKIFLRNCTIQEVHREAFKG 121
            |...:|||      .||..              :||.: .|| ||..:.|:...||.:.|.|...
  Rat    68 LYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPM-NLPKNVRVLHLQENNIQTISRAALAQ 131

  Fly   122 LHILIELDLSGNRIRE--LHPGTF------------------------AGLEKLRNVIINNNEIE 160
            |..|.||.|..|.|..  :..|.|                        ..|::||   ::.|.|.
  Rat   132 LLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPVDLQELR---VDENRIA 193

  Fly   161 VLPNHLFVNLSFLSRI------------------------EF----------------------- 178
            |:.:..|.||:.|.|:                        ||                       
  Rat   194 VISDMAFQNLTSLERLIVDGNLLTNKGIADGTFSHLTKLKEFSIVRNSLSHPPPDLPGTHLIRLY 258

  Fly   179 -RNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETFKDLQKLMHLSLQGNAWNCSCELQDFRD 242
             ::|::..:.|..||....|..:.:..|:|..|.:..|..|..|..|:.:.|.|.|.|.::...:
  Rat   259 LQDNQINHIPLTAFANLRKLERLDISNNQLRMLTQGVFDHLSNLKQLTARNNPWFCDCSIKWVTE 323

  Fly   243 FA--ISKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFIEA--------NHDNIS 297
            :.  |...|......||.|.|:||....|:.....:| |.....:..|..|        ....:|
  Rat   324 WLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC-PTTTPGLPVFTPAPSTVSPTTQSPTVS 387

  Fly   298 LPCRIVGS----PRPN------------------------------------------------V 310
            :|....||    |.|:                                                :
  Rat   388 VPSPSRGSVPPAPAPSKLPTIPDWDGRERATPPISERIQLSIHFVNDTSIQVSWLSLFTVMAYKL 452

  Fly   311 TWVYNKRPLQQYDPRVRVLTSVEQMPEQPSQVLTSELRIVGVRASDKGAYTCVADNRGGRAEAEF 375
            |||.....|.....:.|:::..:|.....:....|..||..| ..|...|..|.|.....|....
  Rat   453 TWVKMGHSLVGGIVQERIVSGEKQHLSLVNLEPRSTYRICLV-PLDAFNYRTVEDTICSEATTHA 516

  Fly   376 QLLVSGDYAGAVSASDGMGMGAIGAPTIDPQTNMFLIICLIITTLLLLLLVAVLTLFWYCRRIKT 440
            ..|.:|  :...|:.:......:|:|        ||:..||...::.:|:|.:....|:..:...
  Rat   517 SYLNNG--SNTASSHEQTTSHTMGSP--------FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGR 571

  Fly   441 Y-----------QKDTTMMSGDGLISSKMDKT---------HNGSMLEGSVIMEMQKSLLNEVNP 485
            |           :||....:|....:|.::.|         :|..:|:|..          .:.|
  Rat   572 YTSQKWKYNRGRRKDDYCEAGTKKDNSILEMTETSFQIVSLNNDQLLKGDF----------RLQP 626

  Fly   486 VEKPPRRTDIESVDGGDDVLEIKKTLLDDTVYVANHSRDEEAVSVAMSDTTTTPRSRHTYVDDAY 550
            :..|         :||.:..:         .::.|:.|                          |
  Rat   627 IYTP---------NGGINYTD---------CHIPNNMR--------------------------Y 647

  Fly   551 ANSLPPDL 558
            .||..|||
  Rat   648 CNSSVPDL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 31/130 (24%)
leucine-rich repeat 76..100 CDD:275380 11/44 (25%)
LRR_8 99..159 CDD:290566 21/86 (24%)
leucine-rich repeat 101..124 CDD:275380 7/22 (32%)
LRR 122..145 CDD:197688 9/48 (19%)
leucine-rich repeat 125..148 CDD:275380 9/48 (19%)
LRR_8 148..207 CDD:290566 18/106 (17%)
leucine-rich repeat 149..172 CDD:275380 8/22 (36%)
leucine-rich repeat 173..196 CDD:275380 8/70 (11%)
LRR_8 197..>229 CDD:290566 8/31 (26%)
leucine-rich repeat 197..220 CDD:275380 6/22 (27%)
LRRCT 229..277 CDD:214507 13/49 (27%)
Ig 296..376 CDD:143165 21/131 (16%)
Flrt2NP_001100220.1 LRRNT 35..66 CDD:214470 9/47 (19%)
LRR 1. /evidence=ECO:0000255 62..87 7/24 (29%)
leucine-rich repeat 65..86 CDD:275378 7/20 (35%)
LRR 2. /evidence=ECO:0000255 88..108 2/20 (10%)
PPP1R42 89..311 CDD:411060 45/225 (20%)
leucine-rich repeat 90..110 CDD:275380 4/20 (20%)
LRR 3. /evidence=ECO:0000255 109..131 7/21 (33%)
leucine-rich repeat 111..134 CDD:275380 7/22 (32%)
LRR 4. /evidence=ECO:0000255 132..157 9/24 (38%)
leucine-rich repeat 135..160 CDD:275380 8/24 (33%)
LRR 5. /evidence=ECO:0000255 159..181 0/21 (0%)
leucine-rich repeat 161..181 CDD:275380 0/19 (0%)
leucine-rich repeat 182..205 CDD:275380 9/25 (36%)
LRR 6. /evidence=ECO:0000255 183..202 6/21 (29%)
LRR 7. /evidence=ECO:0000255 203..228 3/24 (13%)
leucine-rich repeat 206..231 CDD:275380 2/24 (8%)
LRR 8. /evidence=ECO:0000255 229..251 2/21 (10%)
leucine-rich repeat 232..253 CDD:275380 2/20 (10%)
LRR 9. /evidence=ECO:0000255 252..274 3/21 (14%)
leucine-rich repeat 254..277 CDD:275380 4/22 (18%)
LRR 10. /evidence=ECO:0000255 275..298 5/22 (23%)
leucine-rich repeat 278..301 CDD:275380 6/22 (27%)
PCC 282..>359 CDD:188093 20/76 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..413 7/40 (18%)
fn3 426..494 CDD:394996 9/67 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.