DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek5 and Amigo1

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_001004293.1 Gene:Amigo1 / 229715 MGIID:2653612 Length:492 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064
leucine-rich repeat 76..100 CDD:275380
LRR_8 99..159 CDD:290566
leucine-rich repeat 101..124 CDD:275380
LRR 122..145 CDD:197688
leucine-rich repeat 125..148 CDD:275380
LRR_8 148..207 CDD:290566
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
LRR_8 197..>229 CDD:290566
leucine-rich repeat 197..220 CDD:275380
LRRCT 229..277 CDD:214507
Ig 296..376 CDD:143165
Amigo1NP_001004293.1 leucine-rich repeat 44..64 CDD:275380
LRR 1. /evidence=ECO:0000269|PubMed:21983541 62..83
LRR_RI <64..198 CDD:238064
leucine-rich repeat 65..87 CDD:275380
LRR_8 66..122 CDD:290566
LRR 2. /evidence=ECO:0000269|PubMed:21983541 87..108
leucine-rich repeat 88..111 CDD:275380
LRR_8 110..170 CDD:290566
LRR 3. /evidence=ECO:0000269|PubMed:21983541 111..132
leucine-rich repeat 112..135 CDD:275380
LRR 4. /evidence=ECO:0000269|PubMed:21983541 135..156
leucine-rich repeat 136..159 CDD:275380
LRR_8 159..223 CDD:290566
LRR 5. /evidence=ECO:0000269|PubMed:21983541 159..180
leucine-rich repeat 160..186 CDD:275380
LRR 6. /evidence=ECO:0000269|PubMed:21983541 186..206
leucine-rich repeat 187..210 CDD:275380
IG_like 279..357 CDD:214653
Ig 283..342 CDD:299845
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.