DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek5 and LINGO2

DIOPT Version :9

Sequence 1:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster
Sequence 2:NP_001245211.1 Gene:LINGO2 / 158038 HGNCID:21207 Length:606 Species:Homo sapiens


Alignment Length:636 Identity:138/636 - (21%)
Similarity:212/636 - (33%) Gaps:237/636 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGVLVVLMALPPPTAGTTDWMQSCGTC--HCQWNSGKKSADCKNKALTKIPQDMSNEMQVLDFAH 82
            ||:.|||:           :|.|...|  .|:.::..||..|..:.|..||:.:..|.::||.:.
Human    13 LGLAVVLI-----------FMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSK 66

  Fly    83 NQIPELRREEFLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLE 147
            |::..:..|||:  ..|.:.:|.|.:..|..|...||..|..|..|.|.|||::.:..|.|.||.
Human    67 NRLKSVNPEEFI--SYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLS 129

  Fly   148 KLRNVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQ-------- 204
            .|..:.|:.|:|.:|.:::|.:|..|..:|..:|.|..:....|:|.::|..::||:        
Human   130 NLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPT 194

  Fly   205 ---------------------------NRLSHL-HKE---------------------------- 213
                                       .||.|| |.|                            
Human   195 EALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSVTNT 259

  Fly   214 --------TFKDLQKLMHLSL-------------------------------------QG----- 228
                    .||.|..|.||:|                                     ||     
Human   260 NLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLR 324

  Fly   229 ------------------------------NAWNCSCEL------QDFRDFAISKRLYTPPTDCQ 257
                                          |...|.|.|      |....|...:.:      |.
Human   325 VLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRQPTLQFGGQQPM------CA 383

  Fly   258 EPPQLRGKLWSEVPSE----NFAC-RPRIL-GSVRSFIEANHDNISLPCRIVGSPRPNVTWVYNK 316
            .|..:|.:.:.:..|.    .|.| :|:|. ..::..:......:.|.|...|.|:|.::||   
Human   384 GPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECSADGDPQPVISWV--- 445

  Fly   317 RPLQQYDPRVRVLTSVEQMPEQPSQVL---TSELRIVGVRASDKGAYTCVADNRGGRAEAEFQLL 378
                  .||.|.:|:   .....:.||   |.|:|.  .:..|.|.|.|:|.|..|.......|.
Human   446 ------TPRRRFITT---KSNGRATVLGDGTLEIRF--AQDQDSGMYVCIASNAAGNDTFTASLT 499

  Fly   379 VSGDYAGAVSASDGMGMGAIGAP--------TIDPQTN-----MFLIICLIIT-----TLLLLLL 425
            |.|      .|||.. :.|...|        ||...||     :.|...|:.|     |.|.::|
Human   500 VKG------FASDRF-LYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVL 557

  Fly   426 VAVLTLFWYCRRIKTYQKDTTMMSGDGLISSKMD-----KTHNGSMLEGSV 471
            ...|.||.:.|             |.|...:.:|     :.:||:::||.|
Human   558 FCFLLLFVWSR-------------GKGKHKNSIDLEYVPRKNNGAVVEGEV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 27/83 (33%)
leucine-rich repeat 76..100 CDD:275380 6/23 (26%)
LRR_8 99..159 CDD:290566 21/59 (36%)
leucine-rich repeat 101..124 CDD:275380 7/22 (32%)
LRR 122..145 CDD:197688 9/22 (41%)
leucine-rich repeat 125..148 CDD:275380 10/22 (45%)
LRR_8 148..207 CDD:290566 16/93 (17%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 6/22 (27%)
LRR_8 197..>229 CDD:290566 18/175 (10%)
leucine-rich repeat 197..220 CDD:275380 12/94 (13%)
LRRCT 229..277 CDD:214507 11/57 (19%)
Ig 296..376 CDD:143165 23/82 (28%)
LINGO2NP_001245211.1 LRRNT 27..60 CDD:214470 9/32 (28%)
leucine-rich repeat 39..57 CDD:275380 6/17 (35%)
LRR 1 58..79 7/22 (32%)
leucine-rich repeat 59..82 CDD:275380 6/24 (25%)
LRR_8 60..117 CDD:316378 19/58 (33%)
LRR 2 82..103 6/20 (30%)
leucine-rich repeat 83..106 CDD:275380 7/22 (32%)
LRR_8 106..165 CDD:316378 20/58 (34%)
LRR 3 106..127 8/20 (40%)
leucine-rich repeat 107..130 CDD:275380 10/22 (45%)
LRR 4 130..151 6/20 (30%)
leucine-rich repeat 131..154 CDD:275380 7/22 (32%)
LRR_5 146..276 CDD:331043 20/129 (16%)
LRR 5 154..175 5/20 (25%)
leucine-rich repeat 155..178 CDD:275380 6/22 (27%)
LRR 6 178..199 3/20 (15%)
leucine-rich repeat 179..202 CDD:275380 3/22 (14%)
LRR 7 202..223 0/20 (0%)
leucine-rich repeat 203..250 CDD:275380 6/46 (13%)
LRR 8 226..247 4/20 (20%)
LRR_8 250..309 CDD:316378 7/58 (12%)
LRR 9 250..271 1/20 (5%)
leucine-rich repeat 251..274 CDD:275380 3/22 (14%)
LRR 10 274..295 4/20 (20%)
leucine-rich repeat 275..298 CDD:275380 4/22 (18%)
LRR_8 298..357 CDD:316378 3/58 (5%)
LRR 11 298..319 0/20 (0%)
leucine-rich repeat 299..322 CDD:275380 2/22 (9%)
LRR 12 322..343 0/20 (0%)
leucine-rich repeat 323..343 CDD:275380 0/19 (0%)
PCC 327..>391 CDD:188093 9/69 (13%)
I-set 410..500 CDD:254352 26/103 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41933
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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