Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006229953.1 | Gene: | Chrna10 / 64574 | RGDID: | 620142 | Length: | 492 | Species: | Rattus norvegicus |
Alignment Length: | 520 | Identity: | 179/520 - (34%) |
---|---|---|---|
Similarity: | 261/520 - (50%) | Gaps: | 101/520 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LLIMIPAC--AAGPHEKRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITN 110
Fly 111 IWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 175
Fly 176 VPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDLLGVP 240
Fly 241 GKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDSGEKLSLGVT 305
Fly 306 ILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNPDTHEMSEWIR 370
Fly 371 VIFLYWL-----------PCILRMQRPGQVGYECPPPPSSSSSSASGEKKQQIQNVELKERSSKS 424
Fly 425 LLANVLDIDDDFRCNHRCASATLPHQPTYYRTMYRQGDDGSVGPVGPAGPVVDGRLHEAISHTCL 489
Fly 490 TSSAEYELALILKELRWITEQLKKEDETSDITRDWKFAAMVVDRLCLIIFTLFTIIATLAVLFSA 554
Fly 555 554 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 168/499 (34%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 85/206 (41%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 83/287 (29%) | ||
Chrna10 | XP_006229953.1 | LIC | 60..476 | CDD:273305 | 173/503 (34%) |
Neur_chan_LBD | 77..280 | CDD:280998 | 84/203 (41%) | ||
Neur_chan_memb | 288..482 | CDD:280999 | 81/280 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D363540at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |