Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_697298.4 | Gene: | chrna2b / 568849 | ZFINID: | ZDB-GENE-041001-99 | Length: | 550 | Species: | Danio rerio |
Alignment Length: | 534 | Identity: | 200/534 - (37%) |
---|---|---|---|
Similarity: | 290/534 - (54%) | Gaps: | 46/534 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 ACAAGPH---EKRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKL 115
Fly 116 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYVPPGI 180
Fly 181 FKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDLLGVPGKRNE 245
Fly 246 IYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDSGEKLSLGVTILLSL 310
Fly 311 TVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNPDTHEMSEWIRVIFLY 375
Fly 376 WLPCILRMQRPG--------------QV-GYECPPPPSSSSSSASGEKKQQI-QNVELKERSSKS 424
Fly 425 LLANVLD--IDDDFRCNHRCASATLPHQPTYYRTMYRQGDDGSVGP-----VGPAGPVVDG---- 478
Fly 479 --RLHEAISHTCLTSSAEYELALILKELRWITEQLKKEDETSDITRDWKFAAMVVDRLCLIIFTL 541
Fly 542 FTIIATLAVLFSAP 555 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 195/520 (38%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 96/206 (47%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 96/305 (31%) | ||
chrna2b | XP_697298.4 | LIC | 6..543 | CDD:273305 | 199/531 (37%) |
Neur_chan_LBD | 35..241 | CDD:280998 | 96/206 (47%) | ||
Neur_chan_memb | 248..541 | CDD:280999 | 96/305 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |