Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 551 | Identity: | 217/551 - (39%) |
---|---|---|---|
Similarity: | 317/551 - (57%) | Gaps: | 78/551 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 LVYGLGLLIMIPACAAGPHEKRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQL 106
Fly 107 LITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNG 171
Fly 172 SCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDE--------AGGDISSF 228
Fly 229 ITNGEWDLLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLP 293
Fly 294 PDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHR 358
Fly 359 NPDTHEMSEWIRVIFLYWLPCILRMQRPGQVGYE-----------CPPPPSSSSS----SASGEK 408
Fly 409 KQQIQNVELKERSSKSLLANVLDIDDDF--RCN-H-------RCASATLPHQPTYYRTMYRQGDD 463
Fly 464 GSVGPVGPAGPVVDGRLHEAISHT-CLTSSAEYELALILKE---LRWITEQLKKEDETSDITRDW 524
Fly 525 KFAAMVVDRLCLIIFTLFTIIATLAVLFSAP 555 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 210/525 (40%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 105/214 (49%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 100/305 (33%) | ||
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 215/544 (40%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 105/214 (49%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 100/303 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447299 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |