Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022053.1 | Gene: | lgc-28 / 3565225 | WormBaseID: | WBGene00044301 | Length: | 397 | Species: | Caenorhabditis elegans |
Alignment Length: | 308 | Identity: | 63/308 - (20%) |
---|---|---|---|
Similarity: | 113/308 - (36%) | Gaps: | 67/308 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 86 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWK-----P 145
Fly 146 DVLMYNSADE----------GFDGTYATNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRC- 199
Fly 200 ----------EMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDLLGVPGKRNEIYYNCCPEP 254
Fly 255 YID-------------ITFAILIRRKTLYYFFNLIVPCVLIA-SMALLGFTLPPDSGEKLSLGVT 305
Fly 306 ILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILIL 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 63/308 (20%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 40/220 (18%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 23/80 (29%) | ||
lgc-28 | NP_001022053.1 | LGIC_ECD | 62..>187 | CDD:355788 | 24/130 (18%) |
LIC | 67..>329 | CDD:273305 | 55/282 (20%) | ||
Cys-loop | 164..178 | CDD:349787 | 3/13 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |