Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023533.2 | Gene: | lgc-8 / 3564870 | WormBaseID: | WBGene00013338 | Length: | 438 | Species: | Caenorhabditis elegans |
Alignment Length: | 519 | Identity: | 131/519 - (25%) |
---|---|---|---|
Similarity: | 214/519 - (41%) | Gaps: | 141/519 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 KRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNS 126
Fly 127 SEFGGVRDLRIPPHRLWKPDVLMYNSADEG-------------FDGTYATNVVVRNNGSCLYVPP 178
Fly 179 GIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDI------SSFITNGEWDLL 237
Fly 238 GVPGKRNEIYYNCCPEPYIDIT-----FAILIRRKTLYYFFNLIVPCVLIASMALLG-FTLPPDS 296
Fly 297 G---EKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHR 358
Fly 359 NPDTHEMSEWIRVIFLYWLPCILRMQRPGQVGYECPPPPSSSSSSASGEKKQQIQNVELKERSSK 423
Fly 424 SLLANVLDIDDDFRCNHRCASATLPHQPTYYRTMYRQGDDGSVGPVGPAGPVVDGRLHEAISHTC 488
Fly 489 LTSSAEYELALILKELRWITEQLKKEDETSDITRDWKFAAMVVDRLCLIIFTLFTIIATLAVLF 552 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 128/513 (25%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 62/229 (27%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 66/280 (24%) | ||
lgc-8 | NP_001023533.2 | Neur_chan_LBD | 29..237 | CDD:280998 | 62/229 (27%) |
Neur_chan_memb | 244..>348 | CDD:280999 | 40/111 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |