Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001294833.1 | Gene: | pbo-6 / 24104421 | WormBaseID: | WBGene00017375 | Length: | 422 | Species: | Caenorhabditis elegans |
Alignment Length: | 346 | Identity: | 101/346 - (29%) |
---|---|---|---|
Similarity: | 170/346 - (49%) | Gaps: | 26/346 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 LGLLIMIPACAAGPHE---------KRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVD 101
Fly 102 EKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSAD-EGFDGTYATNV 165
Fly 166 VVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFIT 230
Fly 231 NGEWDLLGVPGKRNEIYYNCCPEPYI-DITFAILIRRKTLYYFFNLIVPCVLIASMALLG----F 290
Fly 291 TLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNY 355
Fly 356 HHRNPDTHEMS--EWIRVIFL 374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 97/333 (29%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 59/217 (27%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 35/106 (33%) | ||
pbo-6 | NP_001294833.1 | Neur_chan_LBD | 31..230 | CDD:280998 | 58/207 (28%) |
Neur_chan_memb | 264..>342 | CDD:280999 | 28/77 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |