Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504154.5 | Gene: | lgc-1 / 188099 | WormBaseID: | WBGene00020236 | Length: | 371 | Species: | Caenorhabditis elegans |
Alignment Length: | 335 | Identity: | 80/335 - (23%) |
---|---|---|---|
Similarity: | 151/335 - (45%) | Gaps: | 46/335 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 NYNSLERPVVNESDPLQLSFG-LTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSEFGGVRD 134
Fly 135 LRIPPHRLWKPDVLMYNSAD-EGFDGTYATNVV-VRNNGSCLYVPPGIFKST-----CKIDITWF 192
Fly 193 PFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL--LGVPGKRNEIYYNCCPEPY 255
Fly 256 IDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDS-GEKLSLGVTILLSLTVFLNMVAE 319
Fly 320 TMPATSDAVPLLGTY--FNCIMFMVASSVVSTILILNYH--------HRNPDTHEMSEWIR---- 370
Fly 371 ---VIFLYWL 377 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 80/335 (24%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 50/206 (24%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 29/121 (24%) | ||
lgc-1 | NP_504154.5 | Neur_chan_LBD | 84..>335 | CDD:332142 | 63/262 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |