| Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_510023.2 | Gene: | lgc-13 / 187971 | WormBaseID: | WBGene00011354 | Length: | 399 | Species: | Caenorhabditis elegans |
| Alignment Length: | 316 | Identity: | 81/316 - (25%) |
|---|---|---|---|
| Similarity: | 157/316 - (49%) | Gaps: | 48/316 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 68 LLDNYNSLERPV---VNESDPL--------QLSFGLTL--MQIIDVDEKNQLLITNIWLKLEWND 119
Fly 120 MNLRWNSSEFGGVRDLRIPPHRLWKPDVLMY------NSADEGFDGTYATNVVVRNNGSCLYVPP 178
Fly 179 GI-FKSTCKIDITWFPFDDQRCEMKFG--SWTYDGFQLDLQLQDEAGGDISSF-----ITNGEWD 235
Fly 236 LLGVPGKRNEIYYNCCPEPYIDITFA---ILIRRKTLYYFFNLIVPCVLIASMALLG-FTLPPDS 296
Fly 297 GEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYF--NCIMFMVASSVVSTI 350 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 81/316 (26%) |
| Neur_chan_LBD | 61..268 | CDD:280998 | 53/229 (23%) | ||
| Neur_chan_memb | 275..552 | CDD:280999 | 24/79 (30%) | ||
| lgc-13 | NP_510023.2 | LGIC_ECD_cation | 74..257 | CDD:349790 | 44/196 (22%) |
| LGIC_TM | 259..>335 | CDD:365787 | 24/76 (32%) | ||
| TM1 helix | 259..284 | CDD:349850 | 9/24 (38%) | ||
| TM2 helix | 292..313 | CDD:349850 | 4/20 (20%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR18945 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 3.010 | |||||