Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_500341.1 | Gene: | lgc-9 / 182195 | WormBaseID: | WBGene00015412 | Length: | 464 | Species: | Caenorhabditis elegans |
Alignment Length: | 356 | Identity: | 93/356 - (26%) |
---|---|---|---|
Similarity: | 162/356 - (45%) | Gaps: | 40/356 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 64 LLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNLRWNSSE 128
Fly 129 FGGVRDLRIPPHRLWKPDVLMYNSADEG---FDGTYATNVVVRNNGSCLYVPPGIFKSTCKIDIT 190
Fly 191 WFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFIT-NGEWDLLGVPGK----------RN 244
Fly 245 EIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDS----GEKLSLGVT 305
Fly 306 ILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNPDTHEM--SEW 368
Fly 369 IRVIFLYWLPCILRMQRPGQVGYECPPPPSS 399 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 93/356 (26%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 49/217 (23%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 42/131 (32%) | ||
lgc-9 | NP_500341.1 | Neur_chan_LBD | 42..245 | CDD:280998 | 49/217 (23%) |
Neur_chan_memb | 252..>347 | CDD:280999 | 34/95 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |