Sequence 1: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001240739.1 | Gene: | chrnb1 / 100006941 | ZFINID: | ZDB-GENE-070821-4 | Length: | 492 | Species: | Danio rerio |
Alignment Length: | 530 | Identity: | 174/530 - (32%) |
---|---|---|---|
Similarity: | 273/530 - (51%) | Gaps: | 80/530 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 IMIPACAAG--------PHEKRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQL 106
Fly 107 LITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNG 171
Fly 172 SCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ-LQDEAGGDI------SSFI 229
Fly 230 TNGEWDLLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPP 294
Fly 295 DSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRN 359
Fly 360 PDTHEMSEWIRVIFLYWLPCILRMQRPGQVGYECP---PPPSSSSSSASGEKKQQIQNVE----- 416
Fly 417 --LKERSSKSLLANVLDIDDDFRCNHRCASATLPHQPTYYRTMYRQGDDGSVGPVGPAGPVVDGR 479
Fly 480 LHEAISHTCLTSSAEYELALILKELRWITEQLKKEDETSDITRDWKFAAMVVDRLCLIIFTLFTI 544
Fly 545 IATLAVLFSA 554 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 167/505 (33%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 72/213 (34%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 94/286 (33%) | ||
chrnb1 | NP_001240739.1 | LIC | 6..479 | CDD:273305 | 173/526 (33%) |
Neur_chan_LBD | 26..235 | CDD:280998 | 72/213 (34%) | ||
Neur_chan_memb | 242..478 | CDD:280999 | 94/285 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |