DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment out and slc16a3

DIOPT Version :9

Sequence 1:NP_001285435.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001007912.1 Gene:slc16a3 / 493294 XenbaseID:XB-GENE-483002 Length:473 Species:Xenopus tropicalis


Alignment Length:546 Identity:115/546 - (21%)
Similarity:194/546 - (35%) Gaps:150/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DLGPDFV-APDGGWGWVVCLAAGLNNFFLFPALQQYGLIYRVRMQSLGFDAKQTTTIVNVVMAIS 94
            |.||..| ||||||||.|.....:...|.:...:...:.::..::..|.....|..|.::::|:.
 Frog     7 DDGPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIREFGIGYSDTAWISSILLAML 71

  Fly    95 SLVGIVNGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIFGIGLGLAMAATSLA 159
            ...|.:......||..|.|.:.|...|.||:..::|||:.....:....|.|:||.|....:.:.
 Frog    72 YGTGPLCSICVNRFGCRPVMMVGGLFAALGMVAASFCTSILTIYLTAGVITGLGLALNFQPSLIM 136

  Fly   160 VNTYFKLKRRRATGFSWTITGLGPIFFPQVSTV--LLGY-YGAQGTILIYAGIAMNAILCALTLQ 221
            :|.||..:|..|.|.:   ....|:|...:|.:  :|.| :|.:|..||..|:.:|...|...::
 Frog   137 LNRYFDKRRPLANGLA---AAGSPVFLCALSPLGQILQYEFGWRGGFLILGGLLLNCCACGALMR 198

  Fly   222 PVLWHVKKPEKPVHNTIEGIAETEKLQP--ELLEANGNLLSPSNDPWKDYECKYCQYQKRSKRGL 284
            |:        :|....:|.:.:|::::|  :||:                   :..::.|     
 Frog   199 PL--------EPPKKAVEEVKDTKEIKPKKKLLD-------------------FSVFKDR----- 231

  Fly   285 FSSQYLFNVDDPERPGYEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRS 349
                           |:.|......::..   |.|...:.:.|.:                    
 Frog   232 ---------------GFVIYTLAASIMVL---GLFVPPVFVVSYA-------------------- 258

  Fly   350 RENLDRLEQNRHDQG-PDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPGQDELLRCTCAEDK 413
                       .|.| |||.:|..|....:.:              :::||        ||....
 Frog   259 -----------KDIGIPDTKAAFLLTVLGFID--------------IFARP--------TCGVIT 290

  Fly   414 ALLQKTAESLQVNLFNNSADNTEAEEEAKRRMTFFQKVSKFFDLDLLRDFTFVNLAV-----GMS 473
            .|  |......|.||.                 |....:.|.||......:|..|.|     |:|
 Frog   291 GL--KQVRPYAVYLFG-----------------FAMVFNGFTDLMGSMADSFGGLVVFCIFFGIS 336

  Fly   474 IMMFGEMNFSVLTPFI-LNSFGYTDTQISLVMSLLACMDISVRFLAPLALEKVKLDNRVLFAFGI 537
            ..|.|.:.|.||...: .:.|   .:.|.||:...||   :|....|.|.:.:....:.:|.|  
 Frog   337 YGMVGALQFEVLMAIVGTHKF---SSAIGLVLLAEAC---AVLIGPPSAGKILDATGKYMFVF-- 393

  Fly   538 LCIAVGRVVVAFTDSYEIMIGVFLLI 563
              |..|..||  |.::.:.:|.|..|
 Frog   394 --IIAGVEVV--TSAFVLTLGNFFCI 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
outNP_001285435.1 MFS 45..>225 CDD:119392 43/182 (24%)
MFS <464..621 CDD:119392 29/106 (27%)
MFS_1 468..>621 CDD:284993 28/102 (27%)
slc16a3NP_001007912.1 MFS_MCT3_4 21..411 CDD:340988 102/526 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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