DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment out and slc16a12b

DIOPT Version :9

Sequence 1:NP_001285435.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001139286.1 Gene:slc16a12b / 449947 ZFINID:ZDB-GENE-050522-80 Length:488 Species:Danio rerio


Alignment Length:630 Identity:116/630 - (18%)
Similarity:196/630 - (31%) Gaps:233/630 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PDGGWGWVVCLAAGLNNFFLFP----ALQQYGLIYRVRMQ-SLGFDAKQTTTIVNVVMAISSLVG 98
            |||||||::  .||.   |:..    |:.:...|:.|..| ....|...|..|.::|...:.|..
Zfish    24 PDGGWGWMI--VAGC---FVVTVCTRAVTRCISIFFVEFQMHFAKDYSGTAWIHSLVDCTTMLCA 83

  Fly    99 IVNGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIFGIGLGLAMAATSLAVNTY 163
            .:...:..:.:.|...:.|..||.:|:.||:|.|:.......|..:.|:|..|........|..|
Zfish    84 PLGSLIGNQLSCRIAVILGGFLASVGLVLSSFATSLEYLYATLGLLTGLGFALCYTPAIAMVGIY 148

  Fly   164 FKLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQGTILIYAGIAMNAILCALTLQPVLWHVK 228
            |..::..|.|.:.:.:|:|......|..:|:.:|..:|.:||..|..:|..:|...|:|::  :|
Zfish   149 FCERKALAYGIAMSGSGIGTFILAPVVQLLIEHYSWRGALLILGGFVLNLCVCGALLRPII--LK 211

  Fly   229 KPEK---PVHNTIEGIAETEKLQPELLEANGNLLSPSNDPWKDYECKYCQYQKRSKRGLFSSQYL 290
            :.|.   ||                                 |.||                   
Zfish   212 EEEACPLPV---------------------------------DSEC------------------- 224

  Fly   291 FNVDDPERPGYEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRSRENLDR 355
                     ||.:..|..                                               
Zfish   225 ---------GYSVKPPTL----------------------------------------------- 233

  Fly   356 LEQNRHDQGPDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPGQDELLRCTCAEDKALLQKTA 420
                   .|..|.|||:                                                
Zfish   234 -------NGGPTRSAAS------------------------------------------------ 243

  Fly   421 ESLQVNLFNNSADNTEAEEEAKRRMTFFQKVSKFFDLDLLRDF-----TFVNLAVGMSIMMFGEM 480
                               :||:|.  ||.:.::..| |:.||     :|:.||.|.|      :
Zfish   244 -------------------DAKQRC--FQSMQEYHFL-LMPDFLVLAGSFLLLASGCS------L 280

  Fly   481 NFSVLTPFILNSFGYTDTQISLVMSLLACMDI--SVRF--LAPLALEKVKLDNRVLFAFGILC-- 539
            .|..|.|:.|: .|......:.:||:|..:||  ::.|  |.         |.|.|..:..:|  
Zfish   281 PFVYLVPYALD-VGVGHQHAAFLMSILGVIDIVGNITFGWLT---------DRRCLKKYRNICYM 335

  Fly   540 IAVGR-----VVVAFTDSYEIMIGVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNT 599
            .|||.     :.:....::..::...:|.|:.........|::....|....|.:|.|:....:.
Zfish   336 FAVGMEGLCCLFIPLLRTFVWLVPFSVLYGYFDGAYVALIPVVTSDVVGRQYLSSALGVVYFLHA 400

  Fly   600 IFSFAMGPILGILTEAYG-YAATIHTINALTLLALLLWLAESVVR 643
            :......||.|.|.:..| |.||........:.:.||..:.:::|
Zfish   401 VPYLVSPPIGGWLVDTTGTYTATFFLSGFALISSSLLLFSVAIIR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
outNP_001285435.1 MFS 45..>225 CDD:119392 44/184 (24%)
MFS <464..621 CDD:119392 37/168 (22%)
MFS_1 468..>621 CDD:284993 36/164 (22%)
slc16a12bNP_001139286.1 MFS 33..430 CDD:119392 106/602 (18%)
MFS_1 37..407 CDD:284993 96/572 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578817
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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