DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment out and slc16a12

DIOPT Version :9

Sequence 1:NP_001285435.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_989310.1 Gene:slc16a12 / 394932 XenbaseID:XB-GENE-1012784 Length:473 Species:Xenopus tropicalis


Alignment Length:649 Identity:112/649 - (17%)
Similarity:206/649 - (31%) Gaps:239/649 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PDGGWGWVVCLAAGLNNFFL---FPALQQYGLIYRVRMQS-LGFDAKQTTTIVNVVMAISSLVGI 99
            |||||||::.:..    ||:   ..|:.:...|:.|..|| ...|..:|..|.::|...:.|...
 Frog    13 PDGGWGWMIVIGC----FFVTVCTRAVTRCISIFFVEFQSYFAQDYARTAWIHSIVDCSTMLCAP 73

  Fly   100 VNGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIFGIGLGLAMAATSLAVNTYF 164
            :...:...|:.:...:.|..||..|:.||:|.|:.....:.|..:.|:|..|..:.....|..||
 Frog    74 IGSYVSNHFSCQVGIILGGVLASTGLVLSSFATSLEYLYLTLGVLTGLGFALCYSPAIAMVGKYF 138

  Fly   165 KLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQGTILIYAGIAMNAILCALTLQPV------ 223
            :.::..|.|.:.:.:|:|......|..:|:..:..:|.:||..|...|..:|...::|:      
 Frog   139 EKRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVSNLCVCGALMRPITLKEDS 203

  Fly   224 LWHVKKPEKPVHNTIEGIAETEKLQPELLEANGNLLSPSNDPWKDYECKYCQYQKRSKRGLFSSQ 288
            |.:..|.|:         .|.|..|...|:::.:.|           |:.|.:::          
 Frog   204 LHYPLKQEQ---------MENEPTQSGRLDSSCSPL-----------CQDCSHKR---------- 238

  Fly   289 YLFNVDDPERPGYEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRSRENL 353
                                                                             
 Frog   239 ----------------------------------------------------------------- 238

  Fly   354 DRLEQNRHDQGPDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPGQDELLRCTCAEDKALLQK 418
                                                              |..||          
 Frog   239 --------------------------------------------------LCYCT---------- 243

  Fly   419 TAESLQVNLFNNSADNTEAEEEAKRRMTFFQKVSKFFDLDLLRDFTFVNLAVGMSIMMFGEMNFS 483
                                   |:..:|..| .||..|.:    :|:.||.|.|      ..|.
 Frog   244 -----------------------KKEYSFLLK-PKFMVLAV----SFLFLAYGCS------PPFV 274

  Fly   484 VLTPFILNSFGYTDTQISLVMSLLACMDI----------SVRFLAP----LALEKVKLDNRVLFA 534
            .|.|:.|| .|.::.:.:.:||:|..:||          ..|||..    ..|..|.||      
 Frog   275 YLVPYALN-VGVSNQEAAFLMSILGIIDIVGNITFGWVTDTRFLKKHRYCCYLIAVGLD------ 332

  Fly   535 FGILCIAVGRVVVAFTDSYEIMIGVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNT 599
             |:.|:     .:.....:::::...::.|:.........|::....|..:.|.:|.|:....:.
 Frog   333 -GLCCL-----FLPILTRFQLLVPFSVMFGYFDGAYVALIPVVTGDVVGTSSLSSALGVVFFLHA 391

  Fly   600 IFSFAMGPILGILTEAYGYAATIHTINALTLL--ALLLWLAESVVRRI------LGIPSKGLGQ 655
            :......||.|.|.:..|.......::..:::  |:||.||: ::.||      :.:|:..:.|
 Frog   392 VPYLVSPPIAGWLVDTTGDYTAAFLLSGFSMIFCAVLLALAK-IINRIKKRPKAVAVPTSDIKQ 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
outNP_001285435.1 MFS 45..>225 CDD:119392 42/189 (22%)
MFS <464..621 CDD:119392 36/170 (21%)
MFS_1 468..>621 CDD:284993 35/166 (21%)
slc16a12NP_989310.1 2A0111 12..444 CDD:331689 110/637 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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