DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment out and Mct1

DIOPT Version :10

Sequence 1:NP_573378.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_477334.2 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster


Alignment Length:669 Identity:150/669 - (22%)
Similarity:256/669 - (38%) Gaps:129/669 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PKRRDKS---------DLGPDFVAPDGGWGWVVCLAAGLNNFFLFPALQQYGLIYRVRMQSLGFD 79
            |..|.||         |:......|||||||||...:.:.:.........:|:.|...:......
  Fly     5 PPARRKSQQQHEACEMDMERQPTPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEG 69

  Fly    80 AKQTTTIVNVVMAISSLVGIVNGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAI 144
            ...|..|.::::.::...|.::.:...|:..|.|.:.|:.||...:.:|.|.......||.:...
  Fly    70 KGYTAWIASIMVGVTFSSGPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFG 134

  Fly   145 FGIGLGLAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQGTILIYAGI 209
            .|:|.||......::|..||:.||..|||.:...:|.|...|..::..|:|.||.:|.:||..||
  Fly   135 TGLGFGLIYLPAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGI 199

  Fly   210 AMNAILCALTLQPVLWHVKKPEKPVHNTIEGIAETEKLQPELLEANGNLLSPSNDPWKDYECKYC 274
            .:|.|:.....:|:  .::.|.:...||    ..|.||..:....:.|..:...:|.|       
  Fly   200 VLNCIIFGAMFRPL--ELEAPPQTPPNT----PSTPKLAKKSAIIDQNTTAAELEPLK------- 251

  Fly   275 QYQKRSKRGLFSSQYLFNVDDPERPGYEITEPGTPMLARANDGWFGSKLSLTSESAGGARSR--- 336
                    .|...|||      :.|....|......|.|:|......|.:|.:.|.|....:   
  Fly   252 --------VLPKDQYL------QLPQRTDTAVSGGALCRSNSVGHNLKPNLNNNSNGAVNGQGPT 302

  Fly   337 ---TRQALMRQVSSRSRENLDRLEQNRHDQGPDTP--------SAA-------ALYK------PN 377
               ..||:::..|:      |.:.:..|.|...||        ||:       |||:      |:
  Fly   303 LVTPPQAVVKSTSN------DDIARKCHSQLQLTPLRDAHRERSASGTMYRPDALYQGSLHNLPD 361

  Fly   378 YFNREREDLDRYASKTSVYSRPGQDELLRCTCAEDKALLQKTAESLQVNLFNNSADNTEAEEEAK 442
            |.: .|.||.|..|.:.|..|.|.                          ...|.:.::::||||
  Fly   362 YVS-SRNDLSRSMSGSGVIKRYGS--------------------------LRQSNNVSQSQEEAK 399

  Fly   443 ----------RRMTFFQKVSKFFDLDLLRDFTFVNLAVGMSIMMFGEMNFSVLTPFI-----LNS 492
                      .|.||    ::..:..||:|..||..:|.......|   |:|  |::     ..:
  Fly   400 CCGCITCSKETRDTF----AEMMNFSLLKDMVFVIFSVSNFCTSIG---FNV--PYLYVVAYAET 455

  Fly   493 FGYTDTQISLVMSLLACMDISVRFLAPLALEKVKLDNRVLFAFGILCIAVGRVVVAFTDSYEIMI 557
            ...|.|..|.::|.:...:...|.:.....:|..::..:::...:....|...:|.....::.:.
  Fly   456 LKLTKTDASYLISTIGVANTVGRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLA 520

  Fly   558 GVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNTIFSFAMGPILG----ILTEAYG- 617
            ....:.||........:.:|:...:.|::|..|.||.|:|..|.|| :||.:|    .||::|. 
  Fly   521 FYCCVFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLLLFQGIASF-IGPPIGGWMYDLTDSYAP 584

  Fly   618 ---YAATIHTINALTLLAL 633
               .|..:..|:.|.:.|:
  Fly   585 AFLMAGLMIAISGLVMFAI 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
outNP_573378.1 MFS 44..>221 CDD:475125 45/176 (26%)
MFS <459..626 CDD:475125 38/179 (21%)
Mct1NP_477334.2 MFS_MCT_SLC16 34..604 CDD:340910 140/640 (22%)

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