DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment out and mct-1

DIOPT Version :9

Sequence 1:NP_001285435.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_503655.2 Gene:mct-1 / 189489 WormBaseID:WBGene00021227 Length:544 Species:Caenorhabditis elegans


Alignment Length:598 Identity:127/598 - (21%)
Similarity:214/598 - (35%) Gaps:161/598 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PDGGWGWVVCLAAGLNNFFLFPALQQYGLIYRVRMQSLGFDAKQTTTIVNVVMAISS----LVGI 99
            ||||:||||..|:.|.|..:...:...|.|    :..:..|...:|::...|::|.:    |.|.
 Worm    40 PDGGYGWVVVAASFLVNMAVDGVIYTCGKI----LVPIWADQFGSTSVAGAVISILTGCYYLAGP 100

  Fly   100 VNGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIFGIGLGLAMAATSLAVNTYF 164
            :..:....|..|.||:.|:.||.....||.|.:|.|:..:....:.|||.|.....:.:.::|||
 Worm   101 LASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVLGGIGFGCMYLPSIVILSTYF 165

  Fly   165 KLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQ-GTILIY-AGIAMNAILCALTLQPVL--- 224
            ..||..|||.:...:|:|.:.|..::..:..|:|.. |:.::| |.||::..|.:|...|:.   
 Worm   166 AKKRSVATGIAVCGSGIGTMVFSTINGPVFDYFGKDVGSFMVYLAAIAISGSLFSLLFAPLKATE 230

  Fly   225 WHVKKPEKPVHNTIEGIAETEKLQPELLEANGNLLSPSNDPWKDYECKYCQYQKRSKRGLFSSQY 289
            ..|||..|.|.|                                ||.|                 
 Worm   231 HQVKKVAKMVRN--------------------------------YEGK----------------- 246

  Fly   290 LFNVDDPERPGYEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRSRENLD 354
                  ||.|                                      .|.|:..|    |.:|:
 Worm   247 ------PEEP--------------------------------------TQRLLEDV----RNDLE 263

  Fly   355 RLEQNRHDQGPDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPGQDELLRCTCAEDKALLQKT 419
            .|                       ||...:.|.:.:..:..||           :....|.:|.
 Worm   264 EL-----------------------NRPGHNADTFYAGNAPVSR-----------SRSNTLDRKA 294

  Fly   420 AESLQVNLFNNSADNTEAEEEAKRRMT-FFQKVSKFFDLDLLRDFTFVNLAVGMSIMMFGEMNFS 483
            |||.:.::.:.:..:|......|.:.| |.:.:....|.|||...:|:.|||..:..:     .|
 Worm   295 AESAEAHVVHATEHHTVHHVVKKSKFTKFKESLCSVLDKDLLFSPSFMTLAVSGTFTV-----LS 354

  Fly   484 VLTPFILNSFG-------YTDTQISLVMSLLACMDISVRFLAPLALEKVKLDNRVLFAFGILCIA 541
            .|.||:..:..       :||.::||.::|:...:|..|....:..:..|:.  .|....:..|.
 Worm   355 FLVPFVYLALAMKQKNPDFTDAELSLPVTLIGAFNIMFRIGCGMVADHPKMS--ALQVSNVATII 417

  Fly   542 VGRVVVAFTDSYEIMIGVFLLIGF--GKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNTIFSFA 604
            .|..::......|:...|...|.|  |.|.......:|....:.:.:|..|.|:.::|..|.:..
 Worm   418 AGTSMLFVPFCTELWHYVVFCIPFSAGVACFAALRSVICVELIGVEKLSNAFGILMVFMGIGAVV 482

  Fly   605 MGPILGILTEAYG 617
            .|||...:.:..|
 Worm   483 GGPIAAQIKDITG 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
outNP_001285435.1 MFS 45..>225 CDD:119392 51/188 (27%)
MFS <464..621 CDD:119392 35/163 (21%)
MFS_1 468..>621 CDD:284993 34/159 (21%)
mct-1NP_503655.2 MFS_MCT_SLC16 45..519 CDD:340910 123/593 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158598
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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