DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8051 and gem-1

DIOPT Version :9

Sequence 1:NP_001285434.1 Gene:CG8051 / 32925 FlyBaseID:FBgn0031012 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_001379120.1 Gene:gem-1 / 181458 WormBaseID:WBGene00008214 Length:771 Species:Caenorhabditis elegans


Alignment Length:736 Identity:134/736 - (18%)
Similarity:252/736 - (34%) Gaps:258/736 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PAKKKRDKSD------LGEDFVAPDGGWGWLVSVASGVNILVTFALAQQFGILF----RDRMAGL 117
            |...:.|.||      |.|..|..|||:||||.:||.:...|....:..|||:|    .....|.
 Worm    44 PVSARSDDSDAESVESLTERPVYKDGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHFQCGR 108

  Fly   118 GISSSELTTIINTQIAVSAFTGLLNGPLFRRYTYRVVALVGSVLTFLGLFWMVFADTFAVYIMSF 182
            .:|....:..::..:.:|...|:::..|..|.:..:.|.:.:|...:.:        |..:|..|
 Worm   109 FVSMITASMFLSLPLIMSPVAGIVSDILGCRMSIIIGASICTVSCIIAM--------FCSHIFFF 165

  Fly   183 SILYGFGRGLTVS----ASSLAVNTYFKVKRRTATAFQFGVAGLGPIVCP--------YFATYML 235
            .|.:|.|.|:.:|    |:.:.|..||:.:|..||:|.....|:|.::.|        |.|::: 
 Worm   166 MISFGLGCGVGMSFIYNAAIVIVTYYFEKRRGLATSFAVSGTGVGTVIYPILLNLSMIYLASFV- 229

  Fly   236 YEFGVQGTTLLFAGASLHTIACSLIYQPVKWHVVKRDRDAEALQQVQPLAEREDQDED------- 293
              ..::...:.||.............:.|:|...|.|......|:.  :|:.:|:.|:       
 Worm   230 --SDIRIILIFFAVMYFVIAVIGFFIKDVEWESDKTDFKLRKFQKY--IAKMDDEKENNTNPTDA 290

  Fly   294 IIKNVVE-PETPVL----------------PRAND--------GWFGSRASLNSVGTRNRLNTWE 333
            .:::.:. |...:|                .|.:|        ..|.::..::|:...:.|||  
 Worm   291 FMRHAISLPNLNILNNHSGSIQSICDAAKAERKSDKPTRSKSVALFDNKHQMSSIPEYSMLNT-- 353

  Fly   334 KSDSNGHVELKRLSSKDSNPGRQLRSI--SVSHSIK-----EEEATGYN---------------- 375
            ...:..|::|:..:|..:....|.|.:  .||.|:.     |:||...|                
 Worm   354 NLANLEHLDLELANSPCTTVRAQRRRVISKVSMSVDQINELEDEAFHINLFQSSTESESDDESSS 418

  Fly   376 ------SDHEVQHTELTEKEKQE---------LEDEK---------------------------- 397
                  :|.:...:||:||...|         ||:..                            
 Worm   419 DDSEMSNDGDSSSSELSEKNLDEPTTKLINKNLENVAFRATSSVPNSARMNRNSVAAGTSNMFGG 483

  Fly   398 -----------------------------ERQRRKKL-----------------PFYMKVV---- 412
                                         .|:.||.:                 |.|.:|:    
 Worm   484 RVIASNAIQSRHATNLIAMGKIPSAPMLVARKNRKSMIGKPIQGFYKKWLETEKPIYQEVIHCRA 548

  Fly   413 ----------IFF------------DMDLLR----DITYVNLAVGITLINFVEINFAILTPFILS 451
                      ::|            .:|.|:    :..|:..::||:  ||:    ::|....|:
 Worm   549 YIYLALSVLCLYFILDVPYVCFYEYSIDTLKMEESEANYIYYSIGIS--NFI----SVLLFGTLA 607

  Fly   452 DLGFNKDQIALAMSTLG-----FFDLVVRFLIPLITAKINLSNRTFFVVGILGMCIGRMFLSMTS 511
            |..........|.|.:|     .|...:..|:.|:               |:|:|.|   :::||
 Worm   608 DWTRKHITTIYASSMVGVGITIMFSTRINSLVELV---------------IVGVCFG---VTITS 654

  Fly   512 NFYVMMAIFLWLGLNKAFRTVFWSLIIPSYVPLKRLPAAAGLQLLMSGTFSMIFGPLIGLIRDHT 576
            | ||:.:|                |:...:..:.....|..|..::.|..|:|..|:..|:|:.|
 Worm   655 N-YVLQSI----------------LVTICFEDVNLFQVAYSLIAMIEGVASLIGPPIFALVREAT 702

  Fly   577 SYAVTLNLLNALCVMAFAGWY 597
            .....:..::.:..:| :|::
 Worm   703 GGYTVVFFISGIFALA-SGFF 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8051NP_001285434.1 MFS 86..>266 CDD:119392 42/195 (22%)
MFS <428..598 CDD:119392 35/175 (20%)
MFS_1 440..>572 CDD:284993 26/136 (19%)
gem-1NP_001379120.1 MFS 72..>254 CDD:421695 42/192 (22%)
MFS <543..727 CDD:421695 40/222 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.