DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8034 and Slc16a13

DIOPT Version :9

Sequence 1:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_758959.1 Gene:Slc16a13 / 69309 MGIID:1916559 Length:428 Species:Mus musculus


Alignment Length:219 Identity:58/219 - (26%)
Similarity:105/219 - (47%) Gaps:17/219 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RKVAPDGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAAVI--ISALDVCMNFS 69
            |...|||||||:........:.....:..|||:.|.:.:....   ..||.:  |:::.:.:...
Mouse     4 RAEPPDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFE---EQAARVSWIASIGIAVQQF 65

  Fly    70 GLFVGPLLK-EFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLSTSAAFVALN 133
            |..:|..|. :...|.|.:.|.:|..||:.|.|.|||:.|:..:..:::|.|..|:.:.....|:
Mouse    66 GSPIGSALSTKLGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTPTMACLS 130

  Fly   134 HYFKHKRGQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGSVLLQPVKWH 198
            .||..:|..|:||::.|..:.......|.:.|:..|.:|||:||::.::|:......||:|:.  
Mouse   131 RYFSQRRSLAMGLALTGVGISSFAFAPLFQWLINNYAWRGALLLVSALSLHLMACGALLRPLS-- 193

  Fly   199 MKEEFDDEELMCISALPTPQPQLT 222
            :.|:         :|:..|..|:|
Mouse   194 LTED---------AAVGGPGAQIT 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8034NP_573376.2 MFS 20..>197 CDD:119392 45/179 (25%)
MFS <437..583 CDD:119392
MFS_1 437..>581 CDD:284993
Slc16a13NP_758959.1 MFS 14..392 CDD:119392 51/209 (24%)
2A0111 14..383 CDD:273323 51/209 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.