DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8034 and slc16a3a

DIOPT Version :9

Sequence 1:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001119873.1 Gene:slc16a3a / 561627 ZFINID:ZDB-GENE-061009-16 Length:501 Species:Danio rerio


Alignment Length:646 Identity:129/646 - (19%)
Similarity:211/646 - (32%) Gaps:221/646 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 APDGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAAVIISALDVCMNFSGLFVG 74
            ||||||||...||..::...:.:...:..:.|.:.::|..||.:..|.|.|.|...:..:|....
Zfish    15 APDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIREFGVGYSDTAWISSILLAMLYGTGPLCS 79

  Fly    75 PLLKEFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLSTSAAFVALNHYFKHK 139
            .|:..|..|.|.:.|.|...||:.|.|.|||:.||.....||.|:|:.|:...:.:.||.||..|
Zfish    80 ILVNRFGCRPVMLVGGLFASLGMILASFATSIIHIYLCTGVITGLGMALNFQPSLIMLNRYFSEK 144

  Fly   140 RGQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGSVLLQPVKWHMKEEFD 204
            |..|.||:.||:.:.:..:..|.::|...|.:||..|:|.|:.||......|::|:         
Zfish   145 RPLANGLAAAGSPVALCCLSPLGQVLQYEYGWRGGFLILGGILLNCCACGALMRPL--------- 200

  Fly   205 DEELMCISALPTPQPQLTVGGAGGAASAGAPVFKVIKEDGNEEDALPEMNTLLFHKPHPHQHSMR 269
                                                                             
Zfish   201 ----------------------------------------------------------------- 200

  Fly   270 KNYSEMAMNTMNGSRLGIPKRPTFPRIMSLAGVQSAAHGAGGDSGGYTSQAEVNATQLRCRKASV 334
                             :|     |:.....|:::|.     |.|                    
Zfish   201 -----------------VP-----PKSSEAPGIENAP-----DDG-------------------- 218

  Fly   335 TSNLSYMDFTGSILQVHLNTGDDEFEQNDRELRRVGTATGSIVLGGHRDSFIKMKPTELDKQAEA 399
                                                            |..:|.||         
Zfish   219 ------------------------------------------------DKTVKPKP--------- 226

  Fly   400 AAALDEEAKKKAKKPGFWRRFADLLDIDMLKDKMFLNLLFGLSIFYVAEMNFKMVTPFFFAN--- 461
                                  .|||..:.:|:.||......||..:.    ..|.|.|..:   
Zfish   227 ----------------------KLLDFSVFRDRGFLIYTIAASIMVLG----LFVPPVFVVSYAK 265

  Fly   462 -LGYQKTDVAFCLSITAITDIAARIVLPPIFDRTTIKKRTIFLVS--IIFVALTRSIMAEQTEWT 523
             ||.:.|..|..|||....||.||.....|.....::.|.::|.|  :||..:|..:.:...::|
Zfish   266 ELGNEDTKSALLLSILGFIDIFARPTCGIIAGLQWVRPRCVYLFSFALIFNGITDLVGSLSKDYT 330

  Fly   524 QLMIWLSICGFFRG--SALSNFTLTVSEYCSLEKLPSAFGWHLVGKALFVITFGPLIGLIRDVTD 586
            .|:::....|...|  .|| .|.:.:: ....||..||.|..|:.:|:.|:...|..|.:.|.|.
Zfish   331 SLVVFCIFFGISYGMVGAL-QFEVLMA-VVGTEKFSSAIGLVLMLEAIAVLVGPPSAGRLLDHTK 393

  Fly   587 SYPICIHTQSVCIMICATAWGI-EYLVEYIQSRRRTADAAQL----PTQDVGATTTATSDQ 642
            .|........:.:::.|....| .:|.  |:.:....|||.:    |.::...::...:::
Zfish   394 KYMFVFLLAGIEVVLSALVLAICNFLC--IKKKPEAPDAAAVESGEPVEEKNHSSPPATEE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8034NP_573376.2 MFS 20..>197 CDD:119392 54/176 (31%)
MFS <437..583 CDD:119392 40/153 (26%)
MFS_1 437..>581 CDD:284993 40/151 (26%)
slc16a3aNP_001119873.1 2A0113 16..436 CDD:273325 127/627 (20%)
MFS 22..416 CDD:119392 115/599 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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