DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8034 and slc16a12a

DIOPT Version :9

Sequence 1:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_009291327.1 Gene:slc16a12a / 557762 ZFINID:ZDB-GENE-080721-24 Length:617 Species:Danio rerio


Alignment Length:636 Identity:139/636 - (21%)
Similarity:251/636 - (39%) Gaps:127/636 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASKQP-RKVAPDGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAAVIISALD- 63
            |..|.| ...||||||||:...|..|..:.||::.....:.|.:.....:...:..|.|.|.|| 
Zfish    55 MGEKNPCLATAPDGGWGWMIVAGCFLTTVCTRAVTRCVSIFFVEFQLYFSRDYSATAWIHSLLDC 119

  Fly    64 ---VCMNFSGLFVGPLLKEFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLST 125
               :|... |.::|   ...|.|...:.|.||...||.|:|.|||:..:..|..|:.|:|..||.
Zfish   120 TTMLCAPL-GSYIG---NRLSSRIAIMIGGLLSSTGLLLSSLATSVEFLYLTLGVLTGVGFALSY 180

  Fly   126 SAAFVALNHYFKHKRGQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGSV 190
            :.|...:..||:.::..|.|::|:|:.:|..|:...|::|:|.:.:|||:|:|||:..:..|...
Zfish   181 TPAIAMVGSYFRQRKALAYGIAMSGSGIGTFILAPAVQLLIEFFSWRGALLILAGLVSHLCVCGA 245

  Fly   191 LLQPVKWH--MKEEFDDEELMCISALPTPQPQLTVGGAGGAASAGAPVFKVIKEDGNEEDALPEM 253
            |::|::..  .:.:.|.|....:..|......:.:.|:.....|      |:||           
Zfish   246 LMRPLQSQRGRQNKMDLENGKTVDLLNVKLAYVELRGSMEVTHA------VVKE----------- 293

  Fly   254 NTLLFHKPHPHQHSMRKNYSEMAMNTMNGSRL--------GIPKRPTF--------PRIMSL-AG 301
                ..|..|.::.:|.....:..:.|..|.|        .:.:.|..        ||.:|: |.
Zfish   294 ----MEKKEPSENMLRNGKGWIEADDMKQSHLDGEENHGQDLSENPKTVNKWSEEEPRTISIPAL 354

  Fly   302 VQSAAHGAGGDSGGYTSQAEVNATQLRCRKASVTSNLSYMDFTGSILQVHLNTGDDEFEQNDREL 366
            |||:.                         ..:.:.|.|        |.::...:.:.|.|:.: 
Zfish   355 VQSSG-------------------------LPLENLLKY--------QKNITFPESKSEGNNNQ- 385

  Fly   367 RRVGTATGSIVLGGHRDSFIKMKPTELDKQAEAAAALDEEAKKKAKKPGFWRRFADLLDIDMLKD 431
                                    :.:.|.....|.|.:|:|:..     |    .:|...:||:
Zfish   386 ------------------------STVAKSKVVKAKLLKESKENV-----W----SVLRKTVLKE 417

  Fly   432 KMFL----NLLFGLSIFYVA---EMNFKMVTPFFFANLGYQKTDVAFCLSITAITDIAARIVLPP 489
            ..||    .||..:|..::|   .:.|..:.|:.. :.|......|..:||..::.|...|....
Zfish   418 YSFLLIPDFLLLLVSFLFLAYGCSVPFVYLVPYSL-SAGVSPQQAALVMSILGVSGIIGTITFGW 481

  Fly   490 IFDRTTIKKRTI--FLVSIIFVALTRSIMAEQTEWTQLMIWLSICGFFRGSALSNFTLTVSEYCS 552
            |.||..::...:  :::::....|:...:...:.::.|:.:..|.|:|.|:.::...:..|:..|
Zfish   482 IADRKCLRPYRVVSYMLAVGSEGLSCLFLPLLSGFSLLVPFSLIYGYFDGAYVALIPVVTSDTVS 546

  Fly   553 LEKLPSAFGWHLVGKALFVITFGPLIGLIRDVTDSYPICIHTQSVCIMICA 603
            ..:|.||.|......|:..:...|:.|.:.|.|.||........|. :||:
Zfish   547 SAQLTSALGVVYFLHAIPYLISPPIGGWLVDQTGSYTATFILSGVS-LICS 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8034NP_573376.2 MFS 20..>197 CDD:119392 53/180 (29%)
MFS <437..583 CDD:119392 30/150 (20%)
MFS_1 437..>581 CDD:284993 30/148 (20%)
slc16a12aXP_009291327.1 2A0113 55..601 CDD:273325 139/636 (22%)
MFS 75..604 CDD:119392 128/616 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.110

Return to query results.
Submit another query.