DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8034 and hrm

DIOPT Version :9

Sequence 1:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster


Alignment Length:681 Identity:167/681 - (24%)
Similarity:282/681 - (41%) Gaps:138/681 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAPDGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAAVIISALDVC-MNFSGLF 72
            |.|||||||:...|..|.|:.......|||:||.:.....|...|.||.|.:   :| ..:|.| 
  Fly    48 VPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPA---LCYFLYSSL- 108

  Fly    73 VGP----LLKEFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLSTSAAFVALN 133
             ||    |..::|||.|.:.|.....||:.|:..|:|:..:..:|.|:.|||.|||.......:.
  Fly   109 -GPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVT 172

  Fly   134 HYFKHKRGQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGSVLLQPVKWH 198
            .||...||.|.||.::|:|:|.:|:|.|:|.|||.|.:.|:.|::.|:.||..|.::..:||:.|
  Fly   173 SYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQH 237

  Fly   199 M---------------------------------KEEFDDEELMCISALPTPQPQLTVGG---AG 227
            |                                 |.|..|:.|:..::.|:|   |.:.|   ..
  Fly   238 MVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSP---LYLPGDERLQ 299

  Fly   228 GAASAGAPVFKVIKEDGNEEDA----------LPEMNTLLFHKPHPHQHSM------RKNYSEMA 276
            ...||.|.|.:...:.|:|..:          ||:.|..........|.|:      |.:.:::.
  Fly   300 FVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLT 364

  Fly   277 MNTMNGSRLGIPKRPTFPRIMSLAGVQSAAHGAGGDSGGYTSQAEVNATQLRCRKASVTSNLSYM 341
            :...:.|||.  ||.  |...|...|.:..||                           |.||:.
  Fly   365 LRNSSKSRLS--KRS--PSTSSFLYVSTPYHG---------------------------STLSFQ 398

  Fly   342 --DFTGSILQVHLNTGDDEFEQNDRELRRVGTATGSIVLGGHRDSFIKMKPTELDKQAEAAAALD 404
              :|:.     ||:            ||.:| ::|:    ||..          |...:..:..|
  Fly   399 PKEFSS-----HLS------------LRSMG-SSGT----GHAG----------DSTGQDGSYAD 431

  Fly   405 EEAKKKAKKPGFWRRFADLLDIDMLKDKMFLNLLFGLSIFYVAEMNFKMVTPFFFANLGYQKTDV 469
            .:|:.:|::|    :.:...|:.:|||.|:|.:|...|...::..||.::.|.|....|:.|:..
  Fly   432 VDARGQAQQP----QRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLS 492

  Fly   470 AFCLSITAITDIAARIVLPPIFDRTTIKKRTIFLVSIIFVALTRSIMAEQTEWTQLMIWLSICGF 534
            |:.||:.:.||:..||....:.|...|.|...|:..:....|:.:::.....::.:..|.::.|.
  Fly   493 AYLLSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGL 557

  Fly   535 FRGSALSNFTLTVSEYCSLEKLPSAFGWHLVGKALFVITFGPLIGLIRDVTDSYPICIHTQSVCI 599
            ..|..:....:.:::....|:|.|::|..|....|..:...||.....:..:.|....|...:.:
  Fly   558 ASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTL 622

  Fly   600 MICATAWGIEYLVEYIQSRRRTADAAQLPTQ 630
            :..|:.|.   .:.:|..|:..|: .||..|
  Fly   623 LAGASLWS---FMPWINRRKANAE-EQLDAQ 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8034NP_573376.2 MFS 20..>197 CDD:119392 63/181 (35%)
MFS <437..583 CDD:119392 31/145 (21%)
MFS_1 437..>581 CDD:284993 31/143 (22%)
hrmNP_001286141.1 2A0113 49..653 CDD:273325 166/680 (24%)
MFS 59..>234 CDD:119392 61/179 (34%)
MFS <449..633 CDD:119392 40/186 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I559
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13433
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.920

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