DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8034 and Slc16a6

DIOPT Version :9

Sequence 1:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_006247682.2 Gene:Slc16a6 / 303772 RGDID:735117 Length:606 Species:Rattus norvegicus


Alignment Length:616 Identity:122/616 - (19%)
Similarity:202/616 - (32%) Gaps:190/616 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PDGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAAVIISALDVCMNFSGLFVGP 75
            ||||||||.......:.:.|..:..|||:.|.|.:...:...:..:.|||.....|.|:......
  Rat   103 PDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTI 167

  Fly    76 LLKEFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLSTSAAFVALNHYFKHKR 140
            |...|.:|.|.:.|.||..:|:...|.:..:..:..:..:::|:|...|.......|:.||..:|
  Rat   168 LTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRR 232

  Fly   141 GQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGSVLLQPVKWHMKEEFDD 205
            .....::..|....|......:..|.|...:|.::|.:..:.||..|...||:|:          
  Rat   233 SMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPI---------- 287

  Fly   206 EELMCISALPTPQPQLTVGGAGGAASAGAPVFKVIKEDGNEEDALPEMNTLLFHKPHPHQHSMRK 270
                                             :||..|:                         
  Rat   288 ---------------------------------IIKGPGS------------------------- 294

  Fly   271 NYSEMAMNTMNGSRLGIPKR-PTFPRIMSLAGVQSAAHGAGGDSGGYTSQAEVNATQLRCRKASV 334
                             ||. |..||                                       
  Rat   295 -----------------PKAIPLEPR--------------------------------------- 303

  Fly   335 TSNLSYMDFTGSILQVHLNTGDDEFEQNDRELRRVGTATGSIVLGGHRDSFIKMKPTELDKQAEA 399
             ..:.||                      .|..:..|:..||..|....:..|..|:|..::.|.
  Rat   304 -REVQYM----------------------LENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEV 345

  Fly   400 AAALDEEAKKKAKKPGFWRRFADLLDIDMLKDKMFL-NLLFGLSIFYVAEMNFKMVTPFFFA--- 460
            ..   |:.:.....|...::.|.|||..:|||:.|: ..||||           ..|..|||   
  Rat   346 RV---EQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGL-----------FATLGFFAPSL 396

  Fly   461 -------NLGYQKTDVAFCLSITAITDIAARIVLPPIFDRTTIKKRTIFLVSIIFVALTRSIMAE 518
                   :||......||.||..||.::..||.:..:.:|..|:|..|.|:.:|.:.::......
  Rat   397 YIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTF 461

  Fly   519 QTEWTQLMIWLSICGFFRGSALSNF------TLTVSEYCSLEKLPSAFGWHLVGKALFVITFGPL 577
            .||:..||    :|..|.||.:...      .|...:...:||:.||.|.::..:::..:...||
  Rat   462 ATEFWGLM----LCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPL 522

  Fly   578 IGLIRDVTDSYPICIHT-------QSVCIMI 601
            .||:.|.:..|....::       .:||:.:
  Rat   523 AGLLVDQSKIYSRAFYSCAAGMALAAVCLAL 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8034NP_573376.2 MFS 20..>197 CDD:119392 39/176 (22%)
MFS <437..583 CDD:119392 42/161 (26%)
MFS_1 437..>581 CDD:284993 41/159 (26%)
Slc16a6XP_006247682.2 MFS_MCT7 108..555 CDD:340980 117/611 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3970
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.