DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8034 and Slc16a4

DIOPT Version :9

Sequence 1:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001013935.1 Gene:Slc16a4 / 295356 RGDID:1359655 Length:500 Species:Rattus norvegicus


Alignment Length:614 Identity:120/614 - (19%)
Similarity:221/614 - (35%) Gaps:151/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQPRKVAP-----DGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAAVIISALD 63
            |:..|.:|     ||||||:......|||:....:..:|.:.|....:|.. ||:.....|.::.
  Rat     3 KREEKPSPYTKPLDGGWGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEFE-GTSEQIGWIGSIM 66

  Fly    64 VCMNFSGLFVGPL----LKEFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLS 124
            ..:.||   .|||    ...|..:..:|.|:.|...|..::|.||.:..:..|..::.|:|....
  Rat    67 SSLRFS---AGPLAAIICDIFGEKTTSILGTFLVSGGYLISSWATGIPFLCVTMGLLPGLGSAFL 128

  Fly   125 TSAAFVALNHYFKHKRGQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGS 189
            ...|.|.:..|||.:.|.:..::.:|..:..|:.| ..::|::.||:.||::|...:|||....|
  Rat   129 YQVAAVVITKYFKKRLGLSTAIARSGMGLTFLLAP-FTKLLIDLYDWTGALILFGAIALNLVPSS 192

  Fly   190 VLLQPVKWHMKEEFDDEELMCISALPTPQPQLTVGGAGGAASAGAPVFKVIKEDGNEEDALPEMN 254
            :||:||  |::.:.:.:                :...|...||..|......|..|...|     
  Rat   193 MLLRPV--HIQSDSNSD----------------IKNKGSILSATGPELSHKTETPNRNKA----- 234

  Fly   255 TLLFHKPHPHQHSMRKNYSEMAMNTMNGSRLGIPKRPTFPRIMSLAGVQSAAHGAGGDSGGYTSQ 319
                      |.|:.|:                                ||...:|         
  Rat   235 ----------QESLIKD--------------------------------SAVKKSG--------- 248

  Fly   320 AEVNATQLRCRKASVTSNLSYMDFTGSILQVHLNTGDDEFEQNDRELRRVGTATGSIVLGGHRDS 384
                         ..|:.|:.:                     :.::..:.|..       ||:.
  Rat   249 -------------QPTTTLTVL---------------------ENQIEEISTRP-------HRNR 272

  Fly   385 FIKMKPTELDKQAEAAAALDEEAKKKAKKPGFWRRFADLLDIDMLKDKMFLNLLFGLSIFYVAEM 449
            .:.|             :.|:..|||...   |.....||||.:.::..|  .:|..| |.::::
  Rat   273 PLLM-------------SNDKTYKKKFVS---WNCKEKLLDISLFRNPFF--YIFTWS-FLLSQL 318

  Fly   450 NFKMVTPFFFA---NLGYQKTDVAFCLSITAITDIAARIVLPPIFDRTTIKKRTIFLVSIIFVAL 511
            .:.:.|....|   .||....|.::.:|:..||:..::::...|.|:..|||.......:|...:
  Rat   319 AYFIPTFHLVARAKTLGIDIMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKAYLILCGV 383

  Fly   512 TRSIMAEQTEWTQLMIWLSICGFFRGSALSNFTLTVSEYCSLEKLPSAFGWHLVGKALFVITFGP 576
            |..:....|.:..||.:......|.|..|:.....:.:.....::....|:......:.|::..|
  Rat   384 TNLLAPLATTFPLLMAYTIFFAIFAGGYLALILPVLVDLSKNSRVHRFLGYASFFAGMAVLSGPP 448

  Fly   577 LIGLIRDVTDSYPICIHTQSVCIMICATA 605
            :.|.|.|.|.:|....:....|.::.:.:
  Rat   449 IAGWIYDYTQTYVGSFYFSGTCYILSSVS 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8034NP_573376.2 MFS 20..>197 CDD:119392 48/180 (27%)
MFS <437..583 CDD:119392 29/148 (20%)
MFS_1 437..>581 CDD:284993 28/146 (19%)
Slc16a4NP_001013935.1 MFS_MCT5 20..486 CDD:340979 113/597 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.