DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8028 and MCH2

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_012701.2 Gene:MCH2 / 853659 SGDID:S000001704 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:585 Identity:109/585 - (18%)
Similarity:188/585 - (32%) Gaps:225/585 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IEHRLQSRPAYQMKKSKSYTLEAPDGGWGILVCIGMALPFTSALAALPSFGLVFGEFLKSI---- 71
            :|::|.......:..:.|.::|.||||:|..:.:...|...|...|...:.:....:|::.    
Yeast    13 VENKLNLNGKDDINGNTSISIEVPDGGYGWFILLAFILYNFSTWGANSGYAIYLAHYLENNTFAG 77

  Fly    72 GAETSAMAIITSAFFSSMSFAGLFSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAF 136
            |::....:|...||...:.||.:.:. |:..|         .|.:.:|.|: ||..:.| |:.||
Yeast    78 GSKLDYASIGGLAFSCGLFFAPVITW-LYHIF---------SIQFIIGLGI-LFQGAAL-LLAAF 130

  Fly   137 SV-------VQG--FAFGL---MVPTCYTTFNHYFVKNRVMWMSFAQTLIGLGSMLYPIVMQKLM 189
            ||       .||  ..|||   .:|: .|....:|...|.:.........|||.:::.:.||.::
Yeast   131 SVTLWEIYLTQGVLIGFGLAFIFIPS-VTLIPLWFRNKRSLASGIGTAGSGLGGIVFNLGMQSIL 194

  Fly   190 SWYGFRGCL----LILTGLNAHAVFGMLVMHPVEWHMRRVPIQPEEQEELKELSPTVVIRVQPET 250
            ...|.:..|    :|.|.|:..|                                          
Yeast   195 QKRGVKWALIAQCIICTSLSTIA------------------------------------------ 217

  Fly   251 PLKATREEPNFHTADPGARKLSHAEEQMLKVLSSRASSITSLGNWSGPVVVSDASPQMMHSLQTS 315
             |..||      |...|.|:  |......::|     ....|.|::                   
Yeast   218 -LMLTR------TTHQGLRQ--HKRSYKFELL-----DYDVLSNFA------------------- 249

  Fly   316 RRPSTIAGASGAVAPAHATKKSWVRTIVDFLDLTLLKKPIFVNIVLGITFALYSDITFFTMQPVY 380
                                 .|:  :..|:...:          ||....||| ::.||:    
Yeast   250 ---------------------VWL--LFGFVSFAM----------LGYVVLLYS-LSDFTV---- 276

  Fly   381 LFELGYSRPDTATIIAIGAAADLASR--------------------IFLAITAVCIQVPSRYI-- 423
              .|||:....:.:..:.:...|..|                    :.:||....:.:|.:.:  
Yeast   277 --SLGYTSKQGSYVSCMVSVGSLLGRPIVGHIADKYGSLTVGMILHLVMAILCWAMWIPCKNLAT 339

  Fly   424 -----YLAGAVF-TVFARFAFNGITQFVGMACITAVIGFLRTWLHVPLPLVFADYLPKERFATGY 482
                 .|.|::. |::...| :.:|:.||:..:....|  .||                      
Yeast   340 AIAFGLLVGSIMGTIWPTIA-SIVTRIVGLQKLPGTFG--STW---------------------- 379

  Fly   483 GLFMFIQGNAMFLIGPIVGF-IR-------DKTRDYIFVFHILNGF----MILCAAPWVLEVLIV 535
             :||    .|..|:.||:|. :|       |..|..|||     ||    :.||  .|:|...|:
Yeast   380 -IFM----AAFALVAPIIGLELRSTDTNGNDYYRTAIFV-----GFAYFGVSLC--QWLLRGFII 432

  Fly   536  535
            Yeast   433  432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 43/194 (22%)
MCH2NP_012701.2 MFS_MCT_SLC16 41..428 CDD:340910 99/551 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.