DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8028 and slc16a6a

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001243761.1 Gene:slc16a6a / 564872 ZFINID:ZDB-GENE-110208-1 Length:495 Species:Danio rerio


Alignment Length:544 Identity:127/544 - (23%)
Similarity:208/544 - (38%) Gaps:97/544 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SKSYTLEAPDGGWGILVCIGMALPFTSALAALPSFGLVFGEFLKSIGAETSAMAIITSAFFSSMS 90
            ||.|: |.||||||.:|.:.:.|........:.|||:...:.:.......|.::.|.|.....|:
Zfish    14 SKVYS-EVPDGGWGWIVAVALFLVEVFTYGVIKSFGIFLKDLMSDFNETNSRVSWIISICVFVMT 77

  Fly    91 FAGLFSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAFSVVQGFAFGL-MVPTCYTT 154
            |....|..|..|||.:.|.:.||.|..|||....|.:|...:.:...:..|..:.| .:||. |.
Zfish    78 FTAPLSTMLSNRFGFQPVVMFGGFLISLGTISTAFTSSINQMYLTIGIATGLGYCLTFLPTA-TI 141

  Fly   155 FNHYFVKNRVMWMSFAQTLIGLGSMLYPIVMQKLMSWYGFRGCLLILTGLNAHAVFGMLVMHPVE 219
            .:.||.:.|.:.|:.|.|.....:..:......|.::.|.|..|:::..|....:....::.|: 
Zfish   142 LSQYFSRRRSVVMAMASTGESFATFAFAPAFTALKNYIGRRYTLVVIGTLQGITIICGALLRPI- 205

  Fly   220 WHMRRVPIQPEEQEELKELSPTVVIRVQPETPLKATREEPNFHTADPGARKLSHAEEQMLKVLSS 284
                             .:.||.:    .||..|.|...|               .||:....||
Zfish   206 -----------------VIKPTSL----TETEQKITYTLP---------------VEQVQGFGSS 234

  Fly   285 RASSITSL----GNWSGPVVVSDASPQMMHSLQTSRRPSTIAGASGAVAPAHATKKSWVRTIVDF 345
            ..|.:.||    |..|| :.:.:..|..::..|...                 |.|:      ..
Zfish   235 GDSVVQSLEQEQGLKSG-IELEEVEPVQINLKQQDN-----------------TSKN------RL 275

  Fly   346 LDLTLLKKPIFVNIVLGITFALYSDITFFTMQPVYLFE----LGYSRPDTATIIAIGAAADLASR 406
            ||||:||:..|   :....|.|::.:.||..| :|:.|    ||..|...|.:::|.|.:::..|
Zfish   276 LDLTVLKEGSF---LCYSAFGLFATLGFFAPQ-LYVVELSASLGTERDKAAYMLSIMAISEIIGR 336

  Fly   407 IFLAITAVCIQVPSRYIYLAGAVFTVFARFAFNGITQFVGMACITAVIGFLR---TWLHVPLPLV 468
            :.:.....|..:...::.|............|..:..|.|:.....:.|||.   |..|:|: |.
Zfish   337 LSIGWVMNCGCIRKIFVLLICVSLMCLVLVLFTIVNGFWGLVVCCVLYGFLLGNITSTHIPM-LA 400

  Fly   469 FADYLPKERFATGYGLFMFIQGNAMFLIGPIVGFIRDKTRDYIFVFHILNGFMILCAAPWVLEVL 533
            ..|.:..:|.....|:::.||..|.....|:.|.:.|.|::|...|:       .|||...|..:
Zfish   401 EDDVVGIQRMPLAVGVYVCIQSFAGLAGPPLGGVLVDITQNYSAAFY-------SCAAGMGLGAI 458

  Fly   534 IVKF----------RRRNKIERNN 547
            .:..          ||||..|.|:
Zfish   459 FLGLVRPAKTGHLCRRRNNGENNS 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 40/175 (23%)
slc16a6aNP_001243761.1 MFS 31..464 CDD:119392 110/506 (22%)
MFS_1 33..429 CDD:284993 100/462 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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